LOC_00020HV.3

Submission details

Submission ID
H3_16_2025_02_10RSV-B
Submitting group
WISE
Date submitted
2025-03-31 17:21:57 UTC
Date released
2025-03-31 17:22:43 UTC

Frequencies

Amino acid mutation frequency
{"NS1:Y30H": null, "NS1:N69D": null, "NS1:K74E": null, "NS1:M126I": null, "NS2:D6N": null, "NS2:R19K": null, "NS2:E83K": null, "NS2:H113Q": null, "N:C48W": null, "N:V97I": null, "N:E386D": null, "N:D387E": null, "P:V43I": null, "P:S67G": null, "P:T72A": 0.0, "P:I106T": 0.0, "P:A207T": null, "P:D209N": null, "P:D225N": null, "P:D229N": null, "P:D229G": null, "P:D239E": null, "M:I2T": null, "M:P6S": null, "M:D7N": null, "M:D19N": null, "M:N109S": null, "M:T111I": null, "SH:G2E": null, "SH:T11S": null, "SH:T35A": null, "SH:I49L": null, "SH:I49T": null, "SH:I63T": null, "SH:D64N": null, "G:N4T": null, "G:A57V": 0.0, "G:T70A": 0.0, "G:L71P": 0.0, "G:A74V": 1.0, "G:K85E": 0.0, "G:I87T": 0.0, "G:Y90H": 0.0, "G:V94I": 0.0, "G:E97D": 0.0, "G:R98G": 0.0, "G:R98K": 0.0, "G:S100G": 0.9750000238418579, "G:S100N": 0.9750000238418579, "G:P101S": 0.0, "G:H112N": 0.0, "G:H112Y": 0.9752069711685181, "G:N114S": 0.0, "G:A116T": 0.0, "G:S119P": 0.0, "G:K123T": 0.0, "G:E125D": 0.0, "G:T130A": 0.0, "G:T131A": 0.975409984588623, "G:G135D": 0.0, "G:I137T": 1.0, "G:T139I": 0.0, "G:P140L": 0.0, "G:F166Y": 0.0, "G:I187T": null, "G:S189N": null, "G:K191N": null, "G:T197A": null, "G:T206N": null, "G:P214S": null, "G:L217P": null, "G:P221L": null, "G:T225P": null, "G:P229S": null, "G:P235L": null, "G:T238A": null, "G:P245S": null, "G:V249A": null, "G:D251E": null, "G:I252T": 1.0, "G:T253A": 0.0, "G:K256T": 0.0, "G:K256N": 0.9985399842262268, "G:S265P": 0.0, "G:I268T": 0.9994890093803406, "G:A269V": 0.9879850149154663, "G:L270P": 0.0, "G:S275P": 0.9998360276222229, "G:K276R": 0.0, "G:K276N": 0.0, "G:S283P": 0.0, "G:S283F": 0.0, "G:L284P": 0.0, "G:Y285H": 0.9995830059051514, "G:I288L": 0.0, "G:T292P": 0.0, "G:N294H": 0.0, "G:S295P": 0.0, "G:T296P": 0.0, "G:T300P": 0.0, "G:A301T": 0.0, "G:S307L": 0.0, "F:F12I": 0.0, "F:S24T": 0.0, "F:R42K": 0.0, "F:V103A": 0.0, "F:M115V": 0.0, "F:S146F": 0.0, "F:S190N": 0.999576985836029, "F:R209Q": 0.0, "F:S211N": 0.9991539716720581, "F:I280V": 0.0, "F:Q283P": 0.0, "F:S389P": 0.0, "F:L462Q": 0.0, "F:N517D": 0.0, "M2-1:R20K": 0.0, "M2-1:E65D": 0.0, "M2-1:N121S": 0.0, "M2-1:N175S": null, "M2-2:I2T": null, "M2-2:M27T": 0.9978809952735901, "M2-2:K34R": 0.0, "M2-2:D35N": 0.9995759725570679, "M2-2:C49Y": 0.0, "M2-2:C49F": 0.9983220100402832, "L:N107S": 0.0, "L:Y125H": 0.0, "L:V139I": 0.0, "L:P141L": 0.0, "L:V164M": 0.0, "L:S169P": 0.0, "L:N176S": 0.9996179938316345, "L:N236D": null, "L:I392V": null, "L:F452L": null, "L:S560P": 0.9913759827613831, "L:K570R": 0.9988939762115479, "L:R581K": 0.0, "L:N590S": 0.0, "L:S610P": 0.0, "L:V715I": null, "L:T964I": 0.0, "L:L1031I": 0.0, "L:T1102I": null, "L:T1314A": null, "L:S1320P": 0.0, "L:V1592A": 0.0, "L:I1719T": 0.0, "L:V1721I": 1.0, "L:G1735R": 0.0, "L:T1742I": 0.0, "L:H1750N": 0.0, "L:I1751V": 0.0, "L:R1759K": 0.9982929825782776, "L:F1760L": 0.0, "L:R1778K": 0.003965999931097031, "L:Y1793N": 0.0, "L:H1798N": 0.0, "L:A1807T": 0.0, "L:I1832V": null, "L:I1834V": null, "L:G1896R": null, "L:D1912N": null, "L:A1943S": 0.0, "L:V1965I": 0.0, "L:K1983I": 0.0, "L:T1987I": 0.9993799924850464, "L:I2016M": 0.0, "L:D2111N": 0.0, "L:E2165D": 0.0}
Nucleotide mutation frequency
{"T144C": null, "A261G": null, "A276G": null, "G434A": null, "G599A": null, "G639A": null, "G830A": null, "T922A": null, "T1240G": null, "G1385A": null, "A2254C": null, "T2257A": null, "G2431A": null, "A2503G": null, "A2518G": 0.0, "T2621C": 0.0, "G2923A": null, "G2929A": null, "G2977A": null, "G2989A": null, "A2990G": null, "T3021A": null, "T3158C": null, "C3169T": null, "G3172A": null, "G3208A": null, "A3479G": null, "C3485T": null, "G4263A": null, "A4289T": null, "A4361G": null, "A4403C": null, "T4404C": null, "T4446C": null, "G4448A": null, "A4656C": null, "C4815T": 0.0, "A4853G": 0.0, "T4857C": 0.0, "C4866T": 1.0, "A4898G": 0.0, "T4905C": 0.0, "T4913C": 0.0, "G4925A": 0.0, "A4936T": 0.0, "A4937G": 0.0, "G4938A": 0.0, "A4943G": 0.9750000238418579, "G4944A": 0.9750000238418579, "C4946T": 0.0, "C4979A": 0.0, "C4979T": 0.9752069711685181, "A4986G": 0.0, "G4991A": 0.0, "T5000C": 0.0, "A5013C": 0.0, "A5020C": 0.0, "A5033G": 0.0, "A5036G": 0.975409984588623, "G5049A": 0.0, "T5055C": 1.0, "C5061T": 0.0, "C5064T": 0.0, "T5142A": 0.0, "T5205C": null, "G5211A": null, "A5218T": null, "A5234G": null, "C5262A": null, "C5285T": null, "T5295C": null, "C5307T": null, "A5318C": null, "C5330T": null, "C5349T": null, "A5357G": null, "C5378T": null, "T5391C": null, "C5398A": null, "T5400C": 1.0, "A5402G": 0.0, "A5412C": 0.0, "A5413C": 0.9985399842262268, "T5438C": 0.0, "T5448C": 0.9994890093803406, "C5451T": 0.9879850149154663, "T5454C": 0.0, "T5468C": 0.9998360276222229, "A5472G": 0.0, "A5473C": 0.0, "T5492C": 0.0, "C5493T": 0.0, "T5496C": 0.0, "T5498C": 0.9995830059051514, "A5507C": 0.0, "A5519C": 0.0, "A5525C": 0.0, "T5528C": 0.0, "A5531C": 0.0, "A5543C": 0.0, "G5546A": 0.0, "C5565T": 0.0, "T5709A": 0.0, "T5745A": 0.0, "G5800A": 0.0, "T5983C": 0.0, "A6018G": 0.0, "C6112T": 0.0, "G6244A": 0.999576985836029, "G6301A": 0.0, "G6307A": 0.9991539716720581, "A6513G": 0.0, "A6523C": 0.0, "T6840C": 0.0, "T7060A": 0.0, "A7224G": 0.0, "G7685A": 0.0, "A7821T": 0.0, "A7988G": 0.0, "A8150G": null, "T8184C": null, "T8259C": 0.9978809952735901, "A8280G": 0.0, "G8282A": 0.9995759725570679, "G8325A": 0.0, "G8325T": 0.9983220100402832, "A8837G": 0.0, "T8890C": 0.0, "G8932A": 0.0, "C8939T": 0.0, "G9007A": 0.0, "T9022C": 0.0, "A9044G": 0.9996179938316345, "A9223G": null, "A9691G": null, "T9871C": null, "T10195C": 0.9913759827613831, "A10226G": 0.9988939762115479, "G10259A": 0.0, "A10286G": 0.0, "T10345C": 0.0, "G10660A": null, "C11408T": 0.0, "C11608A": 0.0, "C11822T": null, "A12457G": null, "T12475C": 0.0, "T13292C": 0.0, "T13673C": 0.0, "G13678A": 1.0, "G13720A": 0.0, "C13742T": 0.0, "C13765A": 0.0, "A13768G": 0.0, "G13793A": 0.9982929825782776, "T13795C": 0.0, "G13850A": 0.003965999931097031, "T13894A": 0.0, "C13909A": 0.0, "G13936A": 0.0, "A14011G": null, "A14017G": null, "G14203A": null, "G14251A": null, "G14344T": 0.0, "G14410A": 0.0, "A14465T": 0.0, "C14477T": 0.9993799924850464, "A14565G": 0.0, "G14848A": 0.0, "A15012C": 0.0}

Metadata

Date
2025-02-10
Location
Geneva
Primer protocol
Eawag-2024-RSV subtype A and B
Reference
RSV-B