LOC_000208E.2

Submission details

Submission ID
E3_15_2025_02_06RSV-B
Submitting group
WISE
Date submitted
2025-03-20 14:59:33 UTC
Date released
2025-03-20 15:02:28 UTC

Frequencies

Amino acid mutation frequency
{"NS1:Y30H": null, "NS1:N69D": null, "NS1:K74E": null, "NS1:M126I": 0.0, "NS2:D6N": 0.0, "NS2:R19K": 0.0, "NS2:E83K": null, "N:C48W": 0.0, "N:V97I": null, "N:E386D": null, "N:D387E": null, "P:V43I": null, "P:S67G": null, "P:T72A": null, "P:I106T": null, "P:A207T": null, "P:D209N": null, "P:D225N": null, "P:D229N": null, "P:D229G": null, "P:D239E": 0.0, "M:I2T": 0.0, "M:P6S": 0.9992240071296692, "M:D7N": 0.0, "M:D19N": 0.0, "M:N109S": null, "M:T111I": null, "SH:G2E": 0.01068700011819601, "SH:T11S": 0.0, "SH:T35A": 0.0, "SH:I49L": 0.0, "SH:I49T": 0.0, "SH:I63T": 0.0, "SH:D64N": null, "G:N4T": null, "G:A57V": 0.0, "G:T70A": 0.0, "G:L71P": 0.0, "G:A74V": 0.9971749782562256, "G:K85E": 0.0, "G:I87T": 0.0, "G:Y90H": 0.0, "G:V94I": 0.0, "G:E97D": 0.0, "G:R98G": 0.0, "G:R98K": 0.0, "G:S100G": 0.9920759797096252, "G:S100N": 0.0, "G:P101S": 0.0, "G:H112Y": 1.0, "G:H112N": 0.0, "G:A116T": 0.0, "G:S119P": 0.0, "G:K123T": 0.0, "G:E125D": 0.0, "G:T130A": 0.0, "G:T131A": 0.9871789813041687, "G:G135D": 0.0, "G:I137T": 1.0, "G:T139I": 0.0, "G:P140L": 0.0, "G:F166Y": 0.0, "G:I187T": 0.0, "G:S189N": 0.0, "G:K191N": 0.0, "G:T206N": 0.0, "G:P214S": 0.996999979019165, "G:L217P": 0.0, "G:P221L": 0.9986039996147156, "G:T225P": 0.0, "G:P229S": 0.5247049927711487, "G:P235L": 0.0, "G:T238A": 0.0, "G:P245S": 0.0, "G:V249A": 0.0, "G:D251E": 0.0, "G:I252T": 0.9979169964790344, "G:T253A": 0.0, "G:K256T": 0.0, "G:K256N": 0.7041360139846802, "G:S265P": 0.0, "G:I268T": 0.9996039867401123, "G:A269V": 0.0, "G:L270P": 0.0, "G:S275P": 0.0, "G:K276R": 0.0, "G:S283P": 0.0, "G:S283F": 0.0, "G:L284P": 0.0, "G:Y285H": 0.9995409846305847, "G:I288L": 0.0, "G:T292P": 0.0, "G:N294H": 0.0, "G:S295P": 0.0, "G:T296P": 0.0, "G:T300P": 0.0, "G:A301T": 0.0, "G:S307L": 0.0, "F:F12I": 0.0, "F:R42K": 0.0, "F:V103A": 0.0, "F:M115V": 0.0, "F:S146F": 0.0, "F:S190N": 0.9995589852333069, "F:R209Q": 0.0, "F:S211N": 0.999779999256134, "F:I280V": 0.0, "F:S389P": 0.9987170100212097, "F:L462Q": 0.0, "F:N517D": 0.0, "M2-1:R20K": 0.0, "M2-1:E65D": 0.0, "M2-2:I2T": null, "M2-2:M27T": 0.9965819716453552, "M2-2:K34R": 0.0, "M2-2:D35N": 0.9994609951972961, "M2-2:C49F": 0.9985830187797546, "L:N107S": 0.0, "L:Y125H": 0.9989269971847534, "L:V139I": 0.0, "L:P141L": 0.0, "L:V164M": 0.0, "L:S169P": 0.0, "L:N176S": 0.9994270205497742, "L:N236D": null, "L:I392V": 0.0, "L:F452L": null, "L:S560P": 0.9860219955444336, "L:K570R": 0.9981319904327393, "L:R581K": 0.0, "L:N590S": 0.0, "L:S610P": 0.0, "L:V715I": null, "L:T964I": 0.0, "L:L1031I": 0.0, "L:T1102I": 0.0, "L:T1314A": null, "L:I1719T": 0.0, "L:V1721I": 0.0, "L:T1742I": 0.0, "L:H1750N": 0.0, "L:R1759K": 0.9987339973449707, "L:F1760L": 0.0, "L:H1798N": 0.0, "L:A1807T": 0.0, "L:I1832V": null, "L:I1834V": null, "L:D1912N": null, "L:A1943S": 0.0, "L:V1965I": 0.5005390048027039, "L:K1983I": 0.0, "L:T1987I": 0.9991859793663025, "L:I2016M": 0.0, "L:E2165D": null}
Nucleotide mutation frequency
{"T144C": null, "A261G": null, "A276G": null, "G434A": 0.0, "G599A": 0.0, "G639A": 0.0, "G830A": null, "T1240G": 0.0, "G1385A": null, "A2254C": null, "T2257A": null, "G2431A": null, "A2503G": null, "A2518G": null, "T2621C": null, "G2923A": null, "G2929A": null, "G2977A": null, "G2989A": null, "A2990G": null, "T3021A": 0.0, "T3158C": 0.0, "C3169T": 0.9992240071296692, "G3172A": 0.0, "G3208A": 0.0, "A3479G": null, "C3485T": null, "G4263A": 0.01068700011819601, "A4289T": 0.0, "A4361G": 0.0, "A4403C": 0.0, "T4404C": 0.0, "T4446C": 0.0, "G4448A": null, "A4656C": null, "C4815T": 0.0, "A4853G": 0.0, "T4857C": 0.0, "C4866T": 0.9971749782562256, "A4898G": 0.0, "T4905C": 0.0, "T4913C": 0.0, "G4925A": 0.0, "A4936T": 0.0, "A4937G": 0.0, "G4938A": 0.0, "A4943G": 0.9920759797096252, "G4944A": 0.0, "C4946T": 0.0, "C4979T": 1.0, "C4979A": 0.0, "G4991A": 0.0, "T5000C": 0.0, "A5013C": 0.0, "A5020C": 0.0, "A5033G": 0.0, "A5036G": 0.9871789813041687, "G5049A": 0.0, "T5055C": 1.0, "C5061T": 0.0, "C5064T": 0.0, "T5142A": 0.0, "T5205C": 0.0, "G5211A": 0.0, "A5218T": 0.0, "C5262A": 0.0, "C5285T": 0.996999979019165, "T5295C": 0.0, "C5307T": 0.9986039996147156, "A5318C": 0.0, "C5330T": 0.5247049927711487, "C5349T": 0.0, "A5357G": 0.0, "C5378T": 0.0, "T5391C": 0.0, "C5398A": 0.0, "T5400C": 0.9979169964790344, "A5402G": 0.0, "A5412C": 0.0, "A5413C": 0.7041360139846802, "T5438C": 0.0, "T5448C": 0.9996039867401123, "C5451T": 0.0, "T5454C": 0.0, "T5468C": 0.0, "A5472G": 0.0, "T5492C": 0.0, "C5493T": 0.0, "T5496C": 0.0, "T5498C": 0.9995409846305847, "A5507C": 0.0, "A5519C": 0.0, "A5525C": 0.0, "T5528C": 0.0, "A5531C": 0.0, "A5543C": 0.0, "G5546A": 0.0, "C5565T": 0.0, "T5709A": 0.0, "G5800A": 0.0, "T5983C": 0.0, "A6018G": 0.0, "C6112T": 0.0, "G6244A": 0.9995589852333069, "G6301A": 0.0, "G6307A": 0.999779999256134, "A6513G": 0.0, "T6840C": 0.9987170100212097, "T7060A": 0.0, "A7224G": 0.0, "G7685A": 0.0, "A7821T": 0.0, "T8184C": null, "T8259C": 0.9965819716453552, "A8280G": 0.0, "G8282A": 0.9994609951972961, "G8325T": 0.9985830187797546, "A8837G": 0.0, "T8890C": 0.9989269971847534, "G8932A": 0.0, "C8939T": 0.0, "G9007A": 0.0, "T9022C": 0.0, "A9044G": 0.9994270205497742, "A9223G": null, "A9691G": 0.0, "T9871C": null, "T10195C": 0.9860219955444336, "A10226G": 0.9981319904327393, "G10259A": 0.0, "A10286G": 0.0, "T10345C": 0.0, "G10660A": null, "C11408T": 0.0, "C11608A": 0.0, "C11822T": 0.0, "A12457G": null, "T13673C": 0.0, "G13678A": 0.0, "C13742T": 0.0, "C13765A": 0.0, "G13793A": 0.9987339973449707, "T13795C": 0.0, "C13909A": 0.0, "G13936A": 0.0, "A14011G": null, "A14017G": null, "G14251A": null, "G14344T": 0.0, "G14410A": 0.5005390048027039, "A14465T": 0.0, "C14477T": 0.9991859793663025, "A14565G": 0.0, "A15012C": null}

Metadata

Date
2025-02-06
Location
Basel
Primer protocol
Eawag-2024-RSV subtype A and B
Reference
RSV-B