LOC_0001ZPL.1

Submission details

Submission ID
G2_10_2025_02_06RSV-A
Submitting group
WISE
Date submitted
2025-03-05 15:21:24 UTC
Date released
2025-03-05 15:21:43 UTC

Metadata

Date
2025-02-06
Location
Zurich
Primer protocol
Eawag-2024-RSV subtype A and B
Reference
RSV-A

Frequencies

Nucleotide mutation frequency
{"A10052G": null, "A1009G": 0.0, "A10208G": 1.0, "A1021G": 0.0, "A10343G": 1.0, "A10406G": 0.07042299956083298, "A10421T": 0.13380299508571625, "A10457G": 0.0, "A10466G": 0.0, "A1051C": 0.0, "A10649G": null, "A1078G": 0.0, "A1080G": 0.0, "A10838T": 0.0, "A10890C": 0.0, "A10907G": 0.47273701429367065, "A10910G": 0.0, "A11045G": 0.0, "A11093G": 0.0, "A11099G": 0.0, "A1110G": 0.011113000102341175, "A11174G": null, "A11237G": null, "A11531G": 0.0, "A11771G": null, "A11867G": null, "A11871G": null, "A11939G": 0.0, "A12098G": 0.0, "A12314G": null, "A12314T": null, "A12473G": 0.0, "A12476T": 0.0, "A12491G": 0.0, "A12569C": 0.0, "A1263G": null, "A12653G": 0.0, "A12668G": 0.0, "A12689G": 0.0, "A12746G": 0.0, "A12756C": 0.0, "A12932G": null, "A13280G": null, "A13313G": null, "A13331G": null, "A13334G": null, "A13337G": null, "A13382G": 0.9705880284309387, "A13394G": 0.0, "A13451G": 0.9705880284309387, "A13488G": null, "A13497G": null, "A13514C": null, "A1360G": 0.0, "A1361G": 0.0, "A13699G": null, "A13705G": null, "A13708G": null, "A13763T": null, "A13774G": null, "A13869G": 0.5014259815216064, "A13895G": 0.49911001324653625, "A13929G": 0.0, "A1392G": 0.0, "A14025C": 0.0, "A14108G": 0.0, "A14120G": 0.0, "A14123G": 0.0, "A14145C": 0.0, "A1420G": 0.0, "A14391C": 0.0, "A14411G": 0.9998409748077393, "A14513G": 0.0, "A14519G": 0.5318620204925537, "A14588G": 0.46902498602867126, "A14624T": 0.0, "A14627G": 0.0, "A14678G": null, "A14722G": null, "A14726G": null, "A14736G": null, "A1476G": 0.0, "A1518G": 0.0, "A1533G": 0.0, "A1650G": 0.33118200302124023, "A1713G": 0.0, "A2214G": 0.1835779994726181, "A2277T": 0.0, "A2297G": 0.0, "A2323C": 0.13160699605941772, "A2392G": 0.9878129959106445, "A2412G": 0.0, "A2544G": null, "A2560G": null, "A2572C": null, "A2584G": null, "A2596C": null, "A2695G": 1.0, "A2698G": 0.0, "A2755G": 0.0, "A3034T": null, "A3083T": null, "A3085G": null, "A3092G": null, "A3156G": null, "A3169C": null, "A3169T": null, "A3184G": null, "A3185G": null, "A3299G": 0.0, "A3366G": 0.0, "A3378G": 0.0, "A3381G": 0.0, "A3407C": 0.0, "A3426C": 0.0, "A3442C": 0.0545319989323616, "A3453G": 0.0, "A3462T": 0.0, "A3522G": 0.0, "A3564G": 0.9973239898681641, "A3576G": 0.0, "A3642C": 0.05510300025343895, "A3642T": 0.0, "A3663G": null, "A3684G": null, "A3687C": null, "A3751T": null, "A3766G": null, "A3825G": null, "A3840G": null, "A3873T": null, "A3882G": null, "A3915G": 0.019213000312447548, "A4027G": 0.0, "A4092G": 0.0, "A4098T": 0.0, "A4103G": 0.9829890131950378, "A4153G": 0.0, "A4361C": null, "A4506G": null, "A4527G": null, "A4587T": 0.0, "A4687T": null, "A4693G": null, "A4720G": null, "A4732T": null, "A5019G": 0.0, "A5041T": 0.0, "A5065G": 0.0, "A5070G": 0.0, "A5071G": 0.0, "A5125G": 0.0, "A5183G": 0.0, "A5184G": 0.0, "A5263G": 0.0, "A5266G": 0.0, "A5277G": 0.24452300369739532, "A5290G": 0.2681939899921417, "A5313G": 0.0, "A5342G": 0.0, "A5366G": 0.0, "A5376C": 0.0, "A5415G": 0.0, "A5428G": 0.0, "A5435G": 0.9818180203437805, "A5444C": 1.0, "A5448T": 0.0, "A5502G": null, "A5512G": 0.0, "A5535T": 0.0, "A5586T": 0.0, "A5587G": 0.0, "A5599C": 0.0, "A5599G": 0.0, "A5606G": 0.0, "A5609G": 0.9989219903945923, "A5612G": 0.0, "A5612T": 0.999563992023468, "A5626T": 0.0, "A5662T": 0.0, "A5747C": 0.0, "A5786G": 0.0, "A5801G": 0.0, "A6060G": null, "A6101G": null, "A6284G": null, "A6431T": null, "A6467G": null, "A6644G": null, "A6716G": null, "A6716T": null, "A7085G": null, "A7103T": null, "A7112G": null, "A7115C": null, "A7169G": null, "A7205G": null, "A7219G": null, "A7223C": null, "A7433C": 1.0, "A7487C": 0.9997090101242065, "A7491G": 0.0, "A7560G": 0.0, "A7568G": 0.0, "A8101G": 0.0, "A8116G": 0.0, "A8160G": 0.0, "A8173G": 0.0, "A8177G": 0.0, "A8189G": 0.0, "A8269G": 0.9997040033340454, "A8334T": 0.0, "A8345G": 0.0, "A8383G": null, "A8427G": null, "A8471G": 0.0, "A8480G": 0.0, "A8487G": 0.0, "A8512T": 1.0, "A8573C": 0.0, "A8573G": 0.0, "A8573T": 0.9982699751853943, "A8693T": 1.0, "A8758G": 0.0, "A9050G": null, "A9066G": null, "A9066T": null, "A9119G": null, "A940C": 0.0, "A9626T": 0.0, "A9665G": 0.0, "A9719G": 0.0, "A9842G": 0.0, "A992G": 0.0, "C10015A": null, "C10019T": null, "C1012T": 0.9992570281028748, "C10301T": 0.0, "C10328T": 0.0, "C10358T": 0.0, "C1046A": 0.0, "C1046T": 0.012179999612271786, "C1047T": 0.0, "C10530T": null, "C10622T": null, "C10814T": 0.0, "C10862T": 0.0, "C10875T": 0.0, "C10994A": 0.9984300136566162, "C11000T": 0.0, "C11159T": null, "C11192T": null, "C11216T": null, "C11234T": null, "C11375T": 0.38085100054740906, "C11477T": 0.9978659749031067, "C11504T": 0.6372050046920776, "C11543T": 0.0, "C11657T": 0.0, "C11891T": null, "C11895T": null, "C11921T": null, "C11999A": 0.0, "C12026T": 0.0, "C1203T": 0.0, "C12146T": 0.0, "C12161T": 1.0, "C12549T": 0.0, "C12641T": 0.0, "C12692T": 0.0, "C12707T": 0.0, "C12710T": 0.9926720261573792, "C12929T": null, "C13517T": null, "C13619T": null, "C13680T": null, "C13748T": null, "C13897T": 0.4994660019874573, "C14163T": 0.0, "C14356T": 0.0, "C14363T": 0.0, "C14408T": 0.0, "C14414T": 0.0, "C14417T": 0.9964929819107056, "C14555A": 0.0, "C14582T": 0.0, "C14619T": 0.0, "C14630T": 0.0, "C14714T": null, "C14861T": null, "C1547G": 0.0, "C1677T": 0.0, "C1788T": 0.9964389801025391, "C1806T": 0.9997209906578064, "C1809A": 0.31855300068855286, "C2181T": 0.0, "C2244T": 0.16918300092220306, "C2378T": 0.1291150003671646, "C2395A": 0.0, "C2395T": 0.0, "C2410T": 0.15452200174331665, "C2417T": 0.0, "C2479T": null, "C2509T": null, "C2523T": null, "C2532T": null, "C2542T": null, "C2548A": null, "C2592T": null, "C2623T": null, "C2650T": null, "C2767T": 0.0, "C2860T": 0.0, "C2911T": 0.9939579963684082, "C2965T": 0.0, "C2993T": 0.0, "C3023T": null, "C3052T": null, "C3061T": null, "C3064A": null, "C3076T": null, "C3087T": null, "C3099T": null, "C3108T": null, "C3112T": null, "C3117T": null, "C3125T": null, "C3148A": null, "C3155T": null, "C3168T": null, "C3180A": null, "C3182T": null, "C3303T": 0.0, "C3306T": 0.9949749708175659, "C3342T": 0.0, "C3351T": 0.0, "C3384T": 0.0, "C3390T": 0.5055890083312988, "C3397T": 0.0, "C3420T": 0.0, "C3429A": 0.0, "C3480T": 0.0, "C3501T": 0.4402559995651245, "C3552T": 0.05441100150346756, "C3624T": 0.9997320175170898, "C3636A": 0.0, "C3714T": null, "C3729T": null, "C3816T": null, "C3837T": null, "C3864T": null, "C3912T": 0.0, "C3927T": 0.020109999924898148, "C3984T": 0.0, "C4026T": 0.0, "C4037T": 0.9981849789619446, "C4039T": 0.9809610247612, "C4049T": 0.9828389883041382, "C4079T": 0.0, "C4127T": 0.0, "C4149T": 0.0, "C4179T": 0.0, "C4194T": 0.0, "C4208T": 0.0, "C4216A": 0.0, "C4221T": 0.9868180155754089, "C4242T": 0.0, "C4249A": 0.0, "C4307T": null, "C4316T": null, "C4323T": null, "C4373T": null, "C4397T": null, "C4400T": null, "C4427T": null, "C4434T": null, "C4440A": null, "C4486T": null, "C4523T": null, "C4558T": 0.0, "C4559T": 0.0, "C4570A": 0.0, "C4571T": 0.0, "C4624T": 0.0, "C4651G": null, "C4678T": null, "C4681A": null, "C4681T": null, "C4705T": null, "C4850A": null, "C4863T": null, "C4919T": null, "C4952T": null, "C4984T": null, "C4989T": null, "C5004T": 0.7360579967498779, "C5010T": 0.0, "C5026T": 0.0, "C5058T": 0.24403400719165802, "C5067T": 0.0, "C5078T": 0.0, "C5079T": 0.2647640109062195, "C5089A": 0.2618330121040344, "C5203A": 0.0, "C5203T": 0.24948999285697937, "C5268A": 0.24536000192165375, "C5272T": 0.244485005736351, "C5296T": 0.0, "C5301T": 0.0, "C5310T": 0.0, "C5316T": 0.4740949869155884, "C5327T": 0.0, "C5335T": 0.0, "C5352T": 0.0, "C5374A": 1.0, "C5380T": 0.0, "C5393A": 0.0, "C5404G": 0.0, "C5425A": 0.0, "C5425T": 0.0, "C5461A": 0.0, "C5477T": null, "C5478T": null, "C5500T": null, "C5539T": 0.0, "C5544T": 0.0, "C5578T": 0.0, "C5589T": 0.0, "C5605T": 0.0, "C5607A": 0.0, "C5607T": 0.0, "C5650T": 0.0, "C5655T": 0.0, "C5661A": 0.0, "C5677T": 0.0, "C5680T": 0.0, "C5711T": 0.0, "C5714T": 0.0, "C5731T": 0.0, "C5738T": 0.9975749850273132, "C5739T": 0.0, "C5750T": 0.9995880126953125, "C5780T": 0.0, "C5915T": null, "C6005A": null, "C6030T": null, "C6059T": null, "C6140T": null, "C6263T": 0.0, "C6521A": null, "C6653T": null, "C6657T": null, "C6686T": null, "C7249T": null, "C7367T": 0.0, "C7386T": 0.0, "C7403T": 1.0, "C7434T": 0.0, "C7458T": 0.9997090101242065, "C7468A": 0.0, "C7468T": 0.9988359808921814, "C7478T": 0.0, "C7514T": 0.0, "C7566A": 0.0, "C7606A": 0.0, "C7610A": 0.0, "C7666T": 0.0, "C7987T": 0.0, "C8050T": 0.0, "C8077T": 0.0, "C8122T": 0.0, "C8143T": 0.9988639950752258, "C8194T": 0.0, "C8309T": 0.0, "C8321T": 0.0, "C8330T": 0.0, "C8418A": null, "C8468T": 0.0, "C8470T": 0.0, "C8475T": 0.0, "C8481T": 0.0, "C8486T": 0.0, "C8494A": 0.0, "C8618T": 0.0, "C8738T": 0.0, "C9015T": null, "C9043T": null, "C904T": 0.0, "C952T": 0.5261980295181274, "C9632T": 0.0, "C9716T": 0.0, "C983A": 0.0, "C9875T": 0.0, "C990A": 0.0, "C9962T": 0.0, "C9989T": null, "G1000A": 0.9994419813156128, "G10151A": null, "G1034A": 0.0, "G1049A": 0.0, "G1050A": 0.9980170130729675, "G10776T": 0.0, "G1077A": 0.0, "G10793A": 0.0, "G10826A": 0.0, "G11120A": 0.5233160257339478, "G11123A": 0.9997410178184509, "G1131A": 0.0, "G11666A": 0.0, "G11768A": null, "G11780A": null, "G11786A": null, "G11894A": null, "G12206A": 0.0, "G12263A": 0.0, "G12296A": 0.0, "G12386A": null, "G1248A": null, "G12542A": 0.0, "G13274A": null, "G1368A": 0.0, "G13691A": null, "G13692A": null, "G13723A": null, "G13729A": null, "G13734A": null, "G1383A": 0.0, "G13850A": 0.0, "G14036A": 0.0, "G14126A": 0.0, "G14348A": 0.533685028553009, "G14358A": 0.4647189974784851, "G14534A": 0.0, "G14577A": 0.0, "G14873A": null, "G14881A": null, "G1584T": 0.05142100155353546, "G1662A": 0.6482210159301758, "G1848A": null, "G2196A": 0.0, "G2238A": 0.0, "G2298A": 0.48556798696517944, "G2539A": null, "G2593A": null, "G2782A": 0.0, "G2806A": 0.0, "G2980A": 0.0, "G3082T": null, "G3130A": null, "G3146A": null, "G3183A": null, "G3354A": 0.4413590133190155, "G3402A": 0.0, "G3402T": 0.0, "G3531A": 0.5045729875564575, "G3531C": 0.4395360052585602, "G3616A": 0.37516099214553833, "G3616C": 0.08115600049495697, "G4019A": 0.0, "G4081A": 0.013748000375926495, "G4083A": 0.0, "G4111A": 0.0, "G4145A": 0.0, "G4244A": 1.0, "G4248A": 0.011997999623417854, "G4248T": 0.0, "G4252A": 0.0, "G4474A": null, "G4488A": null, "G4496A": null, "G4595T": 0.0, "G4621A": 0.0, "G4950A": null, "G4963A": null, "G4967A": null, "G4968A": null, "G5013T": 0.0, "G5020A": 0.24483199417591095, "G5082T": 0.0, "G5212A": 0.4782400131225586, "G5254A": 0.0, "G5322A": 0.9805330038070679, "G5322C": 0.0, "G5322T": 0.0, "G5338A": 0.0, "G5345A": 0.0, "G5379C": 0.11764699965715408, "G5379T": 0.8823530077934265, "G5412A": 0.0, "G5466A": 0.0, "G5507A": null, "G5534A": 0.0, "G5537A": 0.0, "G5547A": 0.0, "G5558A": 0.0, "G5575A": 0.0, "G5631A": 0.0, "G5633A": 0.9984539747238159, "G5647A": 0.9989539980888367, "G5648A": 0.0, "G5702T": 0.0, "G5763A": 0.0, "G5981A": null, "G6003A": null, "G6075A": null, "G6119A": null, "G6182A": null, "G6269A": 0.0, "G6302A": null, "G6523A": null, "G7037A": null, "G7046A": null, "G7199A": null, "G7455A": 0.0, "G7492A": 0.0, "G7592A": 0.0, "G7624A": 0.0, "G7698A": 0.0, "G7984A": 0.0, "G8020A": 0.0, "G8056A": 0.0, "G8059A": 0.9994069933891296, "G8191A": 0.995635986328125, "G8329A": 0.9983149766921997, "G8459A": 0.9965869784355164, "G8750A": 0.0, "G9026A": null, "G9068A": null, "G9178A": null, "G9250A": null, "G9298A": null, "G9341A": null, "G9758A": 0.0, "G9893A": 0.0, "T10016C": null, "T10034C": null, "T1004C": 0.0, "T10076C": null, "T10193C": 0.0, "T1019C": 0.0, "T1028C": 0.0, "T10323C": 0.9788730144500732, "T1032C": 0.0, "T10346C": 0.0, "T10352C": 0.0, "T1035A": 0.996694028377533, "T1048C": 0.9853649735450745, "T10505C": 0.0, "T10565C": null, "T10607C": null, "T10610C": null, "T10802C": 0.0, "T10850C": 0.9994850158691406, "T10859C": 0.9961360096931458, "T10955C": 0.0, "T10958C": 0.0, "T11034A": 0.0, "T11105G": 0.0, "T11135C": 0.0, "T11219C": null, "T11315C": 0.0, "T11354C": 0.0, "T11447C": 0.0, "T11489A": 0.35354599356651306, "T11579C": 0.0, "T11615A": 0.0, "T11621C": 0.0, "T12149A": 1.0, "T12185C": 0.9756100177764893, "T12239C": 0.0, "T1224C": 0.0, "T12356C": null, "T1242C": 0.012206999585032463, "T1245C": null, "T12494C": 0.0, "T1254C": null, "T12572C": 0.0, "T12611C": 0.0, "T12635C": 0.9969009757041931, "T12737C": 0.0, "T12740C": 0.0, "T12782C": 0.0, "T1281C": null, "T12844A": null, "T1284C": 0.0, "T12893C": null, "T13307C": null, "T13463A": 0.0, "T1359C": 1.0, "T13601A": null, "T13700C": null, "T13730C": null, "T13799A": null, "T1380C": 0.0, "T13862C": 0.0, "T13883A": 0.4975070059299469, "T13883C": 0.0, "T13913C": 0.0, "T13922C": 0.0, "T13958G": 0.4939740002155304, "T13973C": 0.0, "T13988C": 0.5064619779586792, "T14039C": 0.0, "T14117C": 0.0, "T14138A": 0.0, "T1413A": 0.0, "T1422C": 0.0, "T14359A": 0.0, "T14369C": 0.0, "T14396C": 0.0, "T1443C": 0.0, "T14459C": 0.0, "T14517C": 0.0, "T14522C": 0.9940029978752136, "T14529C": 0.0, "T14558C": 0.0, "T14567C": 0.0, "T14576C": 0.5296940207481384, "T14660C": 0.0, "T14795C": null, "T14924C": null, "T1644C": 0.0, "T1653C": 0.0, "T1668C": 0.9970679879188538, "T1671C": 0.9993020296096802, "T1707C": 0.0, "T1708C": 0.0, "T1756C": 0.0, "T1785C": 0.0, "T1791C": 0.0, "T1821C": 0.3190169930458069, "T1935C": null, "T1980C": null, "T2127C": 0.0, "T2139C": 0.0, "T2145C": 0.0, "T2146C": 0.0, "T2154C": 0.1772499978542328, "T2165C": 0.9997860193252563, "T2212C": 0.0, "T2218C": 0.0, "T2268C": 0.0, "T2316A": 0.3116909861564636, "T2416C": 0.15452200174331665, "T2431C": 0.18113499879837036, "T2434C": 0.0, "T2458C": 0.0, "T2481C": null, "T2482C": null, "T2495C": null, "T2502C": null, "T2503C": null, "T2514C": null, "T2533G": null, "T2551C": null, "T2611C": null, "T2689C": 0.9953849911689758, "T2771C": 0.993893027305603, "T2803C": 0.0, "T2917C": 0.0, "T2953C": 0.0, "T3007C": 0.0, "T3022C": null, "T3045C": null, "T3049C": null, "T3059C": null, "T3109C": null, "T3127C": null, "T3129C": null, "T3135A": null, "T3135C": null, "T3136C": null, "T3163C": null, "T3174C": null, "T3178C": null, "T3181C": null, "T3191A": null, "T3195C": null, "T3243C": null, "T3483C": 0.9981170296669006, "T3606A": 0.5027030110359192, "T3612C": 0.4415949881076813, "T3701C": null, "T3738C": null, "T3756C": null, "T3756G": null, "T3807C": null, "T3813C": null, "T3909C": 0.019213000312447548, "T3933C": 0.0, "T4002A": 0.0, "T4020C": 0.01727299951016903, "T4028C": 0.01724099926650524, "T4056C": 0.0, "T4065C": 0.015010000206530094, "T4080C": 0.013748000375926495, "T4090C": 0.014100000262260437, "T4135G": 0.0, "T4136C": 0.011897999793291092, "T4168C": 0.011955000460147858, "T4175A": 0.0, "T4196C": 0.9844499826431274, "T4198G": 0.998803973197937, "T4212C": 0.9886299967765808, "T4250C": 0.0, "T4254C": 0.9873949885368347, "T4274C": 0.5780730247497559, "T4286C": 0.9933109879493713, "T4313C": null, "T4378G": null, "T4454C": null, "T4497C": null, "T4503C": null, "T4512C": null, "T4546C": 0.2222220003604889, "T4566C": 0.7777780294418335, "T4568C": 0.2222220003604889, "T4615C": 0.0, "T4655G": null, "T4786A": null, "T4936C": null, "T4962C": null, "T4995C": 0.0, "T4999C": 0.7170150279998779, "T5043A": 0.0, "T5052A": 0.9966620206832886, "T5075C": 0.0, "T5076C": 0.7528709769248962, "T5080C": 0.0, "T5146C": 0.0, "T5233C": 0.0, "T5302C": 0.0, "T5325C": 0.27883198857307434, "T5328C": 0.0, "T5332C": 0.7521389722824097, "T5341C": 0.2798829972743988, "T5368C": 0.11764699965715408, "T5386C": 0.0, "T5391C": 0.0, "T5468C": 0.0, "T5491C": null, "T5498C": null, "T5531C": 0.0, "T5540C": 0.0, "T5559C": 0.0, "T5561C": 0.0, "T5563C": 0.0, "T5580C": 0.9811509847640991, "T5590A": 0.0, "T5592C": 0.9982870221138, "T5596A": 0.0, "T5636G": 0.0, "T5681A": 0.9974769949913025, "T5682C": 0.9995449781417847, "T5762C": 0.9991819858551025, "T5846A": null, "T5870C": null, "T6052A": null, "T6273C": 1.0, "T6329C": null, "T6468C": null, "T6668C": null, "T697C": null, "T7007C": null, "T7028C": null, "T7040C": null, "T7055G": null, "T7238C": null, "T7268C": null, "T7337A": null, "T7400C": 0.0, "T7423C": 0.0, "T7436C": 0.0, "T7447C": 0.0, "T7448C": 0.0, "T7461C": 0.0, "T7500C": 0.0, "T7529C": 0.9982550144195557, "T7542C": 0.9989820122718811, "T7555A": 0.0, "T7714C": 0.0, "T8041C": 0.0, "T8044A": 0.0, "T8081C": 0.999409019947052, "T8108C": 0.9995129704475403, "T8165C": 0.9988110065460205, "T8279A": 0.0, "T8285C": 0.9985209703445435, "T8327C": 0.9903870224952698, "T8426C": null, "T8483C": 0.0, "T8549C": 1.0, "T8558A": 0.0, "T8561C": 0.0, "T8586C": 0.0, "T8600C": 0.012132000178098679, "T9080C": null, "T9128C": null, "T9228C": null, "T922C": 0.5271610021591187, "T9284C": null, "T928C": 0.0, "T9323A": null, "T9713C": 0.0, "T9773C": 0.0, "T9800C": 1.0, "T9938C": 0.0, "T9956C": 0.0}