LOC_0001J38.7

Submission details

Submission ID
D3_15_2025_01_12RSV-B
Submitting group
WISE
Date submitted
2025-04-17 11:33:17 UTC
Date released
2025-04-17 11:33:37 UTC

Frequencies

Amino acid mutation frequency
{"NS1:Y30H": null, "NS1:N69D": null, "NS1:K74E": null, "NS1:M126I": 0.0, "NS2:D6N": 0.0, "NS2:R19K": 0.9955160021781921, "NS2:I26T": 0.0, "NS2:E83K": null, "NS2:H113Q": null, "N:C48W": 0.06638800352811813, "N:V97I": null, "N:E386D": 0.0, "N:D387E": 0.0, "P:V43I": 0.0, "P:S67G": 0.0, "P:T72A": 0.0, "P:T72I": 0.0, "P:I106T": null, "P:A207T": null, "P:D209N": null, "P:D225N": null, "P:D229N": null, "P:D229G": null, "P:D239E": null, "M:I2T": null, "M:P6S": null, "M:D7N": null, "M:D19N": null, "M:N109S": null, "M:T111I": null, "SH:G2E": null, "SH:T11S": null, "SH:T35A": null, "SH:I49L": null, "SH:I49T": null, "SH:I63T": null, "SH:D64N": null, "G:N4T": null, "G:A57V": 0.0, "G:T70A": 0.0, "G:L71P": 0.0, "G:A74V": 1.0, "G:K85E": 0.0, "G:I87T": 0.0, "G:Y90H": 0.0, "G:V94I": 0.0, "G:E97D": 0.0, "G:R98G": 0.0, "G:R98K": 0.0, "G:V99A": 0.0, "G:S100G": 0.9724230170249939, "G:S100N": 0.0, "G:P101S": 0.0, "G:H112N": 0.0, "G:H112Y": 0.9881579875946045, "G:N114S": 0.0, "G:A116T": 0.0, "G:S119P": 0.0, "G:K123T": 0.0, "G:E125D": 0.0, "G:T130A": 0.0, "G:T131A": 0.9895830154418945, "G:G135D": 0.0, "G:I137T": 0.9974489808082581, "G:T139I": 0.0, "G:P140L": 0.0, "G:F166Y": 0.0, "G:I187T": 0.0, "G:S189N": 0.0, "G:K191N": 0.0, "G:T197A": 0.0, "G:T206N": 0.0, "G:P214S": 0.9970309734344482, "G:L217P": 0.0, "G:P221L": 0.9977399706840515, "G:T225P": 0.0, "G:P229S": 0.0, "G:P235L": 0.0, "G:T238A": 0.0, "G:P245S": 0.0, "G:V249A": 0.0, "G:D251E": null, "G:I252T": 0.9965029954910278, "G:T253A": 0.0, "G:K256T": 0.0, "G:K256N": 0.9649119973182678, "G:S265P": 0.0, "G:I268T": 0.9965389966964722, "G:A269T": 0.0, "G:A269V": 0.9946190118789673, "G:L270P": 0.0, "G:S275P": 0.9998289942741394, "G:K276R": 0.0, "G:K276N": 0.0, "G:S283P": 0.0, "G:S283F": 0.0, "G:L284P": 0.0, "G:Y285H": 0.9992420077323914, "G:I288L": 0.0, "G:T292P": 0.0, "G:N294H": 0.0, "G:S295P": 0.0, "G:T296P": 0.0, "G:T300P": 0.0, "G:A301T": 0.0, "G:S307L": 0.0, "F:F12I": 0.0, "F:S24T": 0.0, "F:R42K": null, "F:V103A": 0.0, "F:M115V": 0.0, "F:S146F": 0.0, "F:S190N": 0.998661994934082, "F:R209Q": 0.0, "F:S211N": 0.9997450113296509, "F:I280V": 0.0, "F:Q283P": 0.0, "F:S389P": 0.9986960291862488, "F:L462Q": 0.0, "F:N517D": 0.04273499920964241, "M2-1:R20K": null, "M2-1:E65D": null, "M2-1:N121S": null, "M2-1:N175S": null, "M2-2:I2T": null, "M2-2:M27T": 0.9936050176620483, "M2-2:K34R": 0.0, "M2-2:D35N": 0.9987829923629761, "M2-2:C49Y": 0.0, "M2-2:C49F": 0.9973009824752808, "L:N107S": 0.0, "L:Y125H": 0.0, "L:V139I": 0.0, "L:P141L": 0.0, "L:V164M": 0.0, "L:S169P": 0.0, "L:N176S": 0.0, "L:N236D": null, "L:I392V": 0.0, "L:F452L": 0.0, "L:S560P": null, "L:K570R": null, "L:R581K": null, "L:N590S": null, "L:S610P": 0.0, "L:V715I": 0.0, "L:T964I": 0.0, "L:L1031I": 0.0, "L:T1102I": 0.0, "L:T1314A": 0.0, "L:S1320P": 0.0, "L:V1592A": null, "L:I1719T": null, "L:V1721I": null, "L:G1735R": null, "L:T1742I": null, "L:N1747D": null, "L:H1750N": null, "L:I1751V": null, "L:R1759K": null, "L:F1760L": null, "L:R1778K": null, "L:Y1793N": null, "L:H1798N": null, "L:A1807T": null, "L:I1832V": null, "L:I1834V": null, "L:G1896R": null, "L:D1912N": null, "L:A1927V": null, "L:A1943S": null, "L:V1965I": null, "L:K1983I": null, "L:T1987I": null, "L:I2016M": null, "L:D2111N": null, "L:E2165D": null}
Nucleotide mutation frequency
{"T144C": null, "A261G": null, "A276G": null, "G434A": 0.0, "G599A": 0.0, "G639A": 0.9955160021781921, "T660C": 0.0, "G830A": null, "T922A": null, "T1240G": 0.06638800352811813, "G1385A": null, "A2254C": 0.0, "T2257A": 0.0, "G2431A": 0.0, "A2503G": 0.0, "A2518G": 0.0, "C2519T": 0.0, "T2621C": null, "G2923A": null, "G2929A": null, "G2977A": null, "G2989A": null, "A2990G": null, "T3021A": null, "T3158C": null, "C3169T": null, "G3172A": null, "G3208A": null, "A3479G": null, "C3485T": null, "G4263A": null, "A4289T": null, "A4361G": null, "A4403C": null, "T4404C": null, "T4446C": null, "G4448A": null, "A4656C": null, "C4815T": 0.0, "A4853G": 0.0, "T4857C": 0.0, "C4866T": 1.0, "A4898G": 0.0, "T4905C": 0.0, "T4913C": 0.0, "G4925A": 0.0, "A4936T": 0.0, "A4937G": 0.0, "G4938A": 0.0, "T4941C": 0.0, "A4943G": 0.9724230170249939, "G4944A": 0.0, "C4946T": 0.0, "C4979A": 0.0, "C4979T": 0.9881579875946045, "A4986G": 0.0, "G4991A": 0.0, "T5000C": 0.0, "A5013C": 0.0, "A5020C": 0.0, "A5033G": 0.0, "A5036G": 0.9895830154418945, "G5049A": 0.0, "T5055C": 0.9974489808082581, "C5061T": 0.0, "C5064T": 0.0, "T5142A": 0.0, "T5205C": 0.0, "G5211A": 0.0, "A5218T": 0.0, "A5234G": 0.0, "C5262A": 0.0, "C5285T": 0.9970309734344482, "T5295C": 0.0, "C5307T": 0.9977399706840515, "A5318C": 0.0, "C5330T": 0.0, "C5349T": 0.0, "A5357G": 0.0, "C5378T": 0.0, "T5391C": 0.0, "C5398A": null, "T5400C": 0.9965029954910278, "A5402G": 0.0, "A5412C": 0.0, "A5413C": 0.9649119973182678, "T5438C": 0.0, "T5448C": 0.9965389966964722, "G5450A": 0.0, "C5451T": 0.9946190118789673, "T5454C": 0.0, "T5468C": 0.9998289942741394, "A5472G": 0.0, "A5473C": 0.0, "T5492C": 0.0, "C5493T": 0.0, "T5496C": 0.0, "T5498C": 0.9992420077323914, "A5507C": 0.0, "A5519C": 0.0, "A5525C": 0.0, "T5528C": 0.0, "A5531C": 0.0, "A5543C": 0.0, "G5546A": 0.0, "C5565T": 0.0, "T5709A": 0.0, "T5745A": 0.0, "G5800A": null, "T5983C": 0.0, "A6018G": 0.0, "C6112T": 0.0, "G6244A": 0.998661994934082, "G6301A": 0.0, "G6307A": 0.9997450113296509, "A6513G": 0.0, "A6523C": 0.0, "T6840C": 0.9986960291862488, "T7060A": 0.0, "A7224G": 0.04273499920964241, "G7685A": null, "A7821T": null, "A7988G": null, "A8150G": null, "T8184C": null, "T8259C": 0.9936050176620483, "A8280G": 0.0, "G8282A": 0.9987829923629761, "G8325A": 0.0, "G8325T": 0.9973009824752808, "A8837G": 0.0, "T8890C": 0.0, "G8932A": 0.0, "C8939T": 0.0, "G9007A": 0.0, "T9022C": 0.0, "A9044G": 0.0, "A9223G": null, "A9691G": 0.0, "T9871C": 0.0, "T10195C": null, "A10226G": null, "G10259A": null, "A10286G": null, "T10345C": 0.0, "G10660A": 0.0, "C11408T": 0.0, "C11608A": 0.0, "C11822T": 0.0, "A12457G": 0.0, "T12475C": 0.0, "T13292C": null, "T13673C": null, "G13678A": null, "G13720A": null, "C13742T": null, "A13756G": null, "C13765A": null, "A13768G": null, "G13793A": null, "T13795C": null, "G13850A": null, "T13894A": null, "C13909A": null, "G13936A": null, "A14011G": null, "A14017G": null, "G14203A": null, "G14251A": null, "C14297T": null, "G14344T": null, "G14410A": null, "A14465T": null, "C14477T": null, "A14565G": null, "G14848A": null, "A15012C": null}

Metadata

Date
2025-01-12
Location
Basel
Primer protocol
Eawag-2024-sequencing of both RSV-A and B
Reference
RSV-B