Submission details

Submission ID
F3_15_2026_03_08RSV-A
Submitting group
Date submitted
2026-04-13 15:19:56 UTC
Date released
2026-04-13 15:34:59 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": null, "N:M1R": null, "N:N9K": null, "N:T11K": null, "N:S21C": null, "N:S32G": null, "N:L47V": null, "N:E55G": null, "N:M67I": null, "N:I80M": null, "N:K84R": null, "N:V97I": null, "N:T99K": null, "N:T99I": null, "N:D103N": null, "N:I104V": null, "N:V113G": null, "N:L114S": null, "N:E122D": null, "N:E144D": 0.0, "N:A146G": 0.07786399871110916, "N:P147S": 0.0,...
Nucleotide mutation frequency
{"A929G": null, "T1112G": null, "T1137G": null, "C1142A": null, "A1171T": null, "A1204G": null, "T1249G": null, "A1274G": null, "G1311T": null, "A1350G": null, "A1361G": null, "G1399A": null, "C1406A": null, "C1406T": null, "G1417A": null, "A1420G": null, "T1448G": null, "T1451C": null, "A1476C": null, "G1542T": 0.0, "C1547G": 0.07786399871110916, "C1549T": 0.0, "A1562C": 0.015255999751389027, "G1564T": 0.032280001789331436, "C1570G": 0.0, "C1571A": 0.0, "G1584A": 0.0, "G1584T": 0.0, "T1610G": 0.0, "A1634T": 0.0, "C1640T": 0.0, "C1645T": 0.0, "T1655G": 0.029062999412417412, "G1664A": 0.036316998302936554, "T1676G": 0.0, "T1679A": 0.0, "G1692A": 0.0, "A1730C": 0.0, "A1730G": 0.0, "T1756C": 0.0, "T1801A": 0.0, "G1843A": null, "G1848T": null, "G1963T": null, "T1964G": null, "T1970G": null, "C2036A": null, "C2065A": null, "G2123A": 0.0, "T2165C": 0.9992210268974304, "A2168G": 0.0, "A2189G": 0.0, "C2254A": 0.0, "A2264G": 0.0, "A2270G": 0.0, "G2275A": 0.0, "G2278A": 0.0, "A2323C": 0.0, "C2367T": 0.0, "G2414A": 0.0, "T2416A": 0.0, "A2421G": 0.0, "T2481C": 0.989982008934021, "T2495C": 0.0, "T2502C": 0.0, "T2514C": 0.0, "C2523T": 0.0, "G2528T": 0.0, "C2532A": 0.0, "C2532T": 0.0, "G2534A": 0.0, "A2544G": 0.0, "T2552C": 0.0, "A2579C": 0.0, "G2582A": 0.0, "G2585A": 0.03675999864935875, "C2592T": 0.0, "C2592A": 0.0, "T2599G": 0.09873100370168686, "T2605A": 0.0, "A2633T": 0.0, "G2761T": 0.0, "G2784A": 0.0, "C2796A": 0.030704999342560768, "G2897A": 0.0, "T2958G": 0.0, "C3016A": 0.0, "A3034T": 0.0, "A3299G": 0.0, "A3327G": 0.0, "G3339T": 0.0, "T3340G": 0.0, "G3354A": 0.0, "C3355G": 0.0, "C3356T": 0.0, "T3365A": 0.0, "G3382T": 0.0, "T3389C": 0.0, "A3407C": 0.0, "C3416A": 0.006940000224858522, "A3442C": 0.48180800676345825, "C3452T": 0.0, "G3458A": 0.0, "T3459G": 0.05697299912571907, "T3464G": 0.0610009990632534, "A3473C": 0.0, "T3498G": 0.0, "T3506G": 0.03278400003910065, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3548A": 0.03039499931037426, "C3551T": 0.0, "C3578A": 0.011082000099122524, "G3616T": 0.0, "G3616A": 0.0958930030465126, "G3616C": 0.06295599788427353, "G3682A": null, "C3689T": null, "G3697A": null, "T3701C": null, "C3722T": null, "C3729G": null, "G3734A": null, "A3751C": null, "A3751T": null, "A3763T": null, "A3766G": null, "A3772C": null, "A3781C": null, "T3786G": null, "C3845T": null, "G3898A": null, "A3925G": 0.0, "A3956C": 0.0, "T3971C": 0.0, "A3979G": 0.0, "G4268T": null, "A4275C": null, "A4287C": null, "C4295A": null, "T4368A": null, "T4378G": null, "T4384A": null, "T4387C": null, "G4399A": null, "G4410A": 0.0, "T4411C": 0.0, "G4447A": 0.0, "T4655G": 0.0, "A4660C": 0.938614010810852, "C4662T": 0.0, "A4665T": 0.0, "A4668C": 0.054767001420259476, "C4673G": 0.04996500164270401, "G4674A": 0.0, "G4679A": 0.0, "C4718A": 0.0, "T4719A": 0.0, "A4746G": 0.0, "G4766A": null, "A4775G": null, "A4775C": null, "A4784G": null, "G4820A": null, "C4821T": null, "G4844A": null, "C4850A": null, "A4851C": null, "A4851G": null, "C4863T": null, "A4879G": null, "C4890T": null, "A4893G": null, "A4898G": null, "A4907C": null, "C4917T": null, "C4919T": null, "C4922T": null, "A4925T": null, "T4941C": null, "G4950A": null, "C4952T": null, "T4953A": null, "T4955A": null, "G4967A": null, "C4974T": null, "T4982A": null, "C4989T": null, "T4992C": 0.0, "A4993G": 0.0, "T4995C": 0.0, "C4998T": 0.0, "T5000C": 0.0, "C5004T": 0.0, "C5009A": 0.0, "C5010T": 0.0, "C5016T": 0.0, "G5018A": 0.0, "T5021C": 0.0, "C5027T": 0.0, "T5043A": 0.9992539882659912, "A5048G": 0.0, "T5049A": 0.0, "T5052A": 0.9966350197792053, "A5057C": 0.008685000240802765, "A5057G": 0.0, "C5058T": 0.0, "A5060G": 0.0, "A5066G": 0.0, "C5069A": 0.0, "T5076C": 0.0, "C5079T": 0.0, "G5082T": 0.0, "A5084C": 0.019416000694036484, "C5087T": 0.0, "A5096G": 0.0, "G5103A": 0.0, "T5163G": 0.0575300008058548, "A5171G": 0.0, "G5172A": 0.0, "A5174C": 0.03945000097155571, "A5183G": 0.9328200221061707, "A5184G": 0.979066014289856, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "G5235A": 0.0, "A5246C": 0.0, "A5246G": 0.0, "A5249T": 0.0, "A5263C": 0.0, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "A5285G": 0.0, "A5289G": 0.0, "G5291A": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301A": 0.0, "C5301T": 0.0, "C5303A": 0.0, "A5306G": 0.999396026134491, "A5309C": 0.0, "C5310T": 0.0, "A5313G": 0.0, "C5316T": 0.0, "G5322C": 0.0, "G5322T": 0.0, "G5322A": 0.995398998260498, "T5325C": 0.0, "C5327T": 0.0, "A5330G": 0.0, "A5333C": 0.0, "C5334A": 0.0, "C5334T": 0.0, "A5337G": 0.0, "C5339T": 0.0, "C5339A": 0.0, "C5340T": 0.0, "A5342C": 0.0, "A5342G": 0.0, "G5346A": null, "A5348G": null, "A5349G": null, "C5352T": null, "A5360C": null, "A5366C": null, "A5372C": null, "A5375G": null, "A5376C": null, "G5379T": null, "G5379C": null, "C5380A": null, "A5384G": null, "C5390A": null, "T5391C": null, "C5393T": null, "C5393A": null, "T5394C": null, "C5397T": null, "T5399A": null, "C5400T": null, "A5403G": null, "C5404G": null, "A5408C": null, "G5412A": null, "C5418T": null, "C5425A": null, "C5425G": null, "A5435G": null, "G5438A": null, "A5439T": null, "C5442T": null, "A5444C": null, "A5444T": null, "C5447A": null, "A5448T": null, "T5450C": null, "A5453C": null, "A5456C": null, "T5459C": 0.0, "C5460T": 0.99959397315979, "G5462A": 0.0, "G5465A": 0.0, "G5466T": 0.0, "G5466A": 0.0, "T5468C": 0.0, "C5472T": 0.0003260000084992498, "C5477T": 0.0, "C5478T": 0.0, "G5486A": 0.0, "T5489C": 0.0, "A5492G": 0.0, "T5498C": 0.9992679953575134, "A5502G": 0.9998189806938171, "G5507A": 0.0, "A5512T": 0.0, "C5514T": 0.0, "C5516A": 0.0, "C5516T": 0.5712850093841553, "A5528G": 0.0, "T5531C": 0.0, "C5532T": 0.0, "G5534A": 0.0, "A5535T": 0.0, "G5537A": 0.0, "T5540C": 0.0, "C5543T": 0.0, "C5544A": 0.0, "C5544T": 0.4305430054664612, "G5547T": 0.0, "G5547A": 0.0, "C5549T": 0.0, "C5550T": 0.0, "G5558A": 0.0, "T5559A": 0.0, "T5559C": 0.5690889954566956, "T5561C": 0.5687170028686523, "C5565T": 0.0, "C5568T": 0.0, "G5573A": 0.0, "A5574G": 0.0, "T5580C": 0.0, "T5582C": 0.0, "C5589T": 0.0, "T5592C": 0.0, "T5594A": 0.0, "C5598T": 0.0, "C5601T": 0.0, "A5603G": 0.0, "A5604G": 0.0, "A5606T": 0.0, "A5606G": 0.0, "A5606C": 0.043097998946905136, "C5607T": 0.5252779722213745, "C5607A": 0.0, "A5609T": 0.0, "A5609G": 0.5239070057868958, "A5612G": 0.0, "G5702T": 0.0, "T5704C": 0.0, "C5707A": 0.0, "C5707T": 0.0, "T5710C": 0.0, "G5724T": 0.0, "C5731T": 0.5520420074462891, "C5734T": 0.0, "C5739T": 0.0, "G5742A": 0.0, "C5743T": 0.0, "G5748A": 0.0, "C5754T": 0.0, "T5755A": 0.0, "G5763A": 0.4454309940338135, "C5764T": 0.0, "C5777A": 0.016750000417232513, "A5788T": 0.0, "C5812T": 0.0, "G5835T": null, "G5847T": null, "G5862T": null, "A5886T": null, "T5901G": null, "G5916C": null, "T5923G": null, "G6000C": null, "C6001A": null, "G6003C": null, "G6003A": null, "T6052A": null, "A6060G": null, "G6126T": 0.14416800439357758, "T6166G": 0.023420000448822975, "T6187G": 0.032294001430273056, "A6192C": 0.052313998341560364, "A6198C": 0.020194999873638153, "T6203G": 0.0, "C6217A": 0.021669000387191772, "T6254G": 0.12219999730587006, "T6271G": 0.0, "G6276A": 0.0408950001001358, "A6286C": 0.020865999162197113, "T6304G": 0.05257999897003174, "G6382A": 0.0, "C6430A": null, "A6467T": null, "T6513G": null, "G6523C": null, "G6523A": null, "A6547C": null, "T6555C": null, "T6562G": null, "G6563T": null, "T6564G": null, "A6569G": null, "A6581C": null, "T6583G": null, "C6607T": null, "T6651C": null, "C6664A": null, "C6667T": null, "A6672C": null, "A6675G": null, "A6676G": null, "C6689A": null, "C6710A": null, "G6712A": null, "T6717A": null, "G6736A": null, "A6765C": null, "C6781T": null, "T6790G": null, "G6900A": null, "A6996C": null, "C7003T": null, "C7024T": null, "A7026G": null, "G7093A": null, "C7127A": null, "C7174T": null, "A7177C": null, "A7186G": null, "T7210A": null, "G7216A": null, "A7219G": null, "C7249T": null, "T7257C": null, "G7323A": null, "T7366C": 0.0, "G7380A": 0.0, "A7395G": 0.0, "C7955T": null, "C7969A": null, "C7997T": 0.0, "C7998T": 0.0, "G8030T": 0.050269998610019684, "T8034C": 0.0, "C8078T": 0.0, "C8096T": 0.0, "A8129C": 0.14557300508022308, "C8143A": 0.031495001167058945, "A8147G": 0.09362799674272537, "A8150C": 0.0, "A8156C": 0.039159998297691345, "A8160G": 0.0, "T8165C": 0.9924629926681519, "A8177G": 0.0, "G8180T": 0.0, "A8183G": 0.0, "T8185G": 0.17861999571323395, "A8189G": 0.0, "C8190T": 0.0, "C8203G": 0.0, "T8212G": 0.09894400089979172, "T8218A": 0.04399799928069115, "A8241G": 0.0, "A8269G": 0.999301016330719, "G8272A": 0.0, "A8326C": 0.0, "G8329A": 0.9973530173301697, "G8329C": 0.0, "C8331T": 0.0, "G8346A": null, "C8377T": null, "A8383G": null, "C8384A": null, "C8418A": null, "A8427G": null, "T8432G": 0.0, "T8549G": 0.0, "C8618G": 0.14315800368785858, "A8640G": 0.9055299758911133, "C8646T": 0.0, "A8670T": 0.0, "A8670C": 0.0, "A8996G": 0.0, "G9018T": 0.0, "C9043T": 0.0, "G9048T": 0.0, "A9052G": 0.0, "A9066T": 0.0, "T9114C": 0.0, "A9165C": 0.09392300248146057, "T9203G": 0.0, "A9211G": 0.0, "T9239A": 0.0, "C9244A": 0.0, "G9250A": 0.0, "A9277G": 0.0, "G9298A": 0.9878789782524109, "G9758C": null, "G9768A": null, "C9770A": null, "T9773A": null, "C9782A": null, "T9791G": null, "C9822A": null, "T9870G": null, "C10015A": null, "A10021T": null, "C10031A": null, "A10032C": null, "G10046T": null, "A10171G": 0.0, "C10210T": 0.0, "A10246G": 0.0, "C10301A": 0.0, "T10316G": 0.145455002784729, "T10323A": 0.1636359989643097, "T10323C": 0.7181820273399353, "A10324C": 0.0, "C10355A": 0.0, "A10516T": null, "G10518T": null, "G10521T": null, "A10569C": null, "T10614G": null, "C10618T": null, "A10626C": null, "C10632T": null, "T10682G": null, "T10703G": null, "G10776T": 0.0, "C10848T": 0.04145500063896179, "G10857T": 0.06662499904632568, "G10870T": 0.045246001332998276, "G10873T": 0.09090899676084518, "A10890C": 0.16102400422096252, "T10908G": 0.0, "G10911A": 0.0, "C10921T": 0.033594999462366104, "T10938C": 0.049173999577760696, "C10964A": 0.06858299672603607, "A10986C": 0.0, "G10996A": 0.08738300204277039, "A10997C": 0.0, "A11001G": 0.9837160110473633, "A11013C": 0.0, "C11016A": 0.0169220007956028, "T11018G": 0.024728000164031982, "G11019A": 0.0, "T11034A": 0.9986460208892822, "T11035G": 0.0, "G11190A": 0.0, "T11239G": 0.07761000096797943, "A11281T": 0.05548400059342384, "A11413C": 0.0, "C11422A": 0.0, "C11422T": 0.0, "G11436A": 0.0, "A11442C": 0.0, "T11443A": 0.0, "C11475T": null, "G11507T": null, "T11508G": null, "G11685T": 0.0, "C11712T": 0.06756500154733658, "A11790C": 0.04001300036907196, "C11791T": 0.0, "T11819G": 0.19974400103092194, "A11827C": 0.19782300293445587, "A11835C": 0.0, "A11844T": 0.0, "C11932T": 0.0, "A12101T": null, "A12111G": null, "T12202C": null, "G12206A": null, "T12424G": 0.043497998267412186, "C12443A": 0.0, "A12464C": 0.0542449988424778, "C12549T": 0.0, "C12553T": 0.0, "A12606T": 0.0, "A12606C": 0.0, "A12616C": 0.08365000039339066, "A12633T": 0.0, "C12649A": 0.018086999654769897, "A12652G": 0.0, "A12667G": 0.0, "C12804T": 0.0, "G12819T": 0.0, "T12844A": 0.0, "T13132C": 0.0, "G13467A": null, "A13488G": null, "A13514C": null, "C13540T": null, "T13601A": null, "A13687G": null, "G13692A": null, "A13699G": null, "A13705G": null, "A13708G": null, "G13723A": null, "G13729A": null, "G13734A": null, "G13735A": null, "C13849T": null, "G13851T": null, "T13855A": null, "T13870C": null, "C13897T": null, "A13917T": null, "C13918T": null, "A13929G": null, "A13929T": null, "T13939G": null, "A13942C": null, "T13962G": null, "T13962C": null, "T13966G": null, "T13966C": null, "A13981C": null, "A13983G": null, "A13983T": null, "T14000G": null, "C14014A": null, "A14031G": null, "A14040T": null, "G14121C": null, "G14161A": null, "A14170G": null, "T14326A": null, "G14331A": null, "C14356T": null, "T14359A": null, "A14381G": null, "A14391C": null, "G14416T": null, "T14446G": null, "A14487C": null, "T14512G": null, "T14514G": null, "A14523C": null, "A14548C": null, "G14571T": null, "C14572T": null, "C14582A": null, "G14586A": null, "T14709C": 0.0, "A14722G": 0.0, "A14736G": 0.0, "C14737T": 0.0, "A14757G": 0.0, "T14759G": 0.0, "G14763T": 0.0, "T14768G": 0.0, "A14841G": 0.0, "G14881A": 0.0, "G14916A": 0.0, "A14955C": null}

Metadata

Date
2026-03-08
Location
Basel
Primer protocol
Eawag-2024-v542
Reference
RSV-A