LOC_0004SPM.1

Submission details

Submission ID
E3_15_2026_02_18RSV-A
Submitting group
Date submitted
2026-03-16 12:43:33 UTC
Date released
2026-03-16 13:04:45 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": 0.0, "N:S21C": 0.0, "N:S32G": 0.0, "N:L47V": null, "N:E55G": null, "N:M67I": null, "N:K84R": null, "N:T99I": null, "N:I104V": null, "N:L114S": null, "N:E122D": 0.0, "N:A146G": 0.0, "N:P147S": 0.0, "N:D152Y": 0.0, "N:P154A": 0.0, "N:P154H": 0.0, "N:D175V": 0.0, "N:S177L": 0.0, "N:L190Q": 0.5382500290870667, "N:M194I": 0.0, "N:N207T": 0.0, "N:N207S": 0.0, "N:Y216H": 0.0,...
Nucleotide mutation frequency
{"A929G": 0.0, "A1171T": 0.0, "A1204G": 0.0, "T1249G": null, "A1274G": null, "G1311T": null, "A1361G": null, "C1406T": null, "A1420G": null, "T1451C": null, "A1476C": 0.0, "C1547G": 0.0, "C1549T": 0.0, "G1564T": 0.0, "C1570G": 0.0, "C1571A": 0.0, "G1584T": 0.0, "G1584A": 0.0, "A1634T": 0.0, "C1640T": 0.0, "T1679A": 0.5382500290870667, "G1692A": 0.0, "A1730C": 0.0, "A1730G": 0.0, "T1756C": 0.0, "T1801A": 0.0, "G2123A": 0.0, "T2165C": 0.9992539882659912, "A2168G": 0.0, "A2189G": 0.0, "C2254A": 0.0, "A2270G": 0.0, "G2275A": 0.0, "A2323C": 0.0, "C2367T": 0.0, "T2416A": 0.0, "T2481C": 0.9889609813690186, "T2495C": 0.0, "T2502C": 0.0, "T2514C": 0.0, "C2523T": 0.4552449882030487, "C2532A": 0.0, "C2532T": 0.0, "G2534A": 0.0, "A2544G": 0.0, "C2592T": 0.0, "G2897A": 0.0, "A3034T": 0.0, "A3299G": 0.0, "A3327G": 0.0, "G3354A": 0.0, "C3355G": 0.0, "C3356T": 0.0, "T3365A": 0.0, "G3382T": 0.0, "T3389C": 0.0, "A3407C": 0.0, "A3442C": 0.0, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3551T": 0.0, "G3616C": 0.0, "G3616T": 0.0, "G3616A": 0.0, "G3682A": 0.0, "G3697A": 0.0, "T3701C": 0.0, "G3734A": 0.4971820116043091, "A3751T": 0.0, "A3766G": 0.0, "C3845T": 0.0, "A3925G": 0.0, "T3971C": 0.0, "A3979G": null, "C4295A": 0.9249489903450012, "T4368A": 0.0, "T4378G": 0.9957079887390137, "T4387C": 0.0, "G4399A": 0.0, "G4410A": 0.0, "T4411C": 0.0, "G4447A": null, "T4655G": null, "A4660C": null, "C4662T": null, "A4665T": null, "G4674A": null, "G4679A": null, "A4746G": 0.0, "A4775G": 0.01235199999064207, "A4784G": 0.0, "G4820A": 0.0, "C4821T": 0.0, "C4850A": 0.0, "A4851G": 0.0, "C4863T": 0.9982659816741943, "A4879G": 0.0, "C4890T": 0.0, "A4898G": 0.0, "C4917T": 0.0, "C4919T": 0.9665650129318237, "C4922T": 0.0, "A4925T": 0.0, "T4941C": 0.0, "G4950A": 0.0, "C4952T": 0.9948490262031555, "T4953A": 0.0, "T4955A": 0.0, "G4967A": 0.0, "C4974T": 0.0, "T4982A": 0.0, "C4989T": 0.0, "T4992C": 0.0, "A4993G": 0.0, "T4995C": 0.0, "C4998T": 0.0, "T5000C": 0.0, "C5004T": 0.0, "C5009A": 0.0, "C5010T": 0.0, "C5016T": 0.0, "G5018A": 0.0, "T5021C": 0.0, "C5027T": 0.0, "T5043A": 0.0, "A5048G": 0.0, "T5049A": 0.0, "T5052A": 0.9987409710884094, "A5057G": 0.0, "A5060G": 0.0, "A5066G": 0.0, "C5069A": 0.0, "T5076C": 0.0, "C5079T": 0.0, "G5082T": 0.0, "C5087T": 0.0, "A5096G": 0.0, "G5103A": 0.0, "A5171G": 0.0, "G5172A": 0.0, "A5183G": 0.0, "A5184G": 0.0, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "A5246G": 0.0, "A5249T": 0.0, "A5263C": 0.0, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "A5285G": 0.0, "A5289G": 0.0, "G5291A": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301T": 0.0, "C5301A": 0.0, "A5306G": 0.0, "C5310T": 0.0, "A5313G": 0.0, "C5316T": 0.0, "G5322A": 0.976095974445343, "G5322T": 0.0, "G5322C": 0.0, "T5325C": 0.7426580190658569, "C5327T": 0.0, "A5330G": 0.0, "C5334T": 0.0, "C5334A": 0.0, "A5337G": 0.0, "C5339A": 0.0, "C5339T": 0.0, "C5340T": 0.0, "A5342G": 0.0, "G5346A": 0.0, "A5348G": 0.0, "A5349G": 0.0, "C5352T": 0.0, "A5372C": 0.0, "A5375G": 0.0, "A5376C": 0.0, "G5379C": 0.0, "G5379T": 0.9975379705429077, "C5380A": 0.0, "A5384G": 0.0031659998930990696, "C5390A": 0.0, "T5391C": 0.0, "C5393T": 0.0, "C5393A": 0.0, "T5394C": 0.0, "C5397T": 0.0, "T5399A": 0.0, "C5400T": 0.0, "C5404G": 0.0, "A5408C": 0.0, "G5412A": 0.0, "C5418T": 0.0, "C5425A": 0.0, "C5425G": 0.0, "A5435G": 0.9809479713439941, "G5438A": 0.0, "A5439T": 0.0, "C5442T": 0.0, "A5444T": 0.0, "A5444C": 0.0, "A5448T": 0.0032240001019090414, "T5450C": 0.0, "T5459C": 0.0, "C5460T": 0.0, "G5462A": 0.0, "G5465A": 0.0, "G5466A": 0.0, "G5466T": 0.0, "T5468C": 0.0, "C5472T": null, "C5477T": null, "C5478T": null, "G5486A": null, "T5489C": null, "A5492G": null, "T5498C": null, "A5502G": null, "G5507A": null, "A5512T": null, "C5514T": null, "C5516T": null, "C5516A": null, "A5528G": null, "T5531C": null, "C5532T": null, "G5534A": null, "A5535T": null, "G5537A": null, "T5540C": null, "C5543T": null, "C5544T": null, "G5547T": null, "G5547A": null, "C5549T": null, "C5550T": null, "G5558A": null, "T5559C": null, "T5561C": null, "C5565T": null, "C5568T": null, "G5573A": null, "A5574G": null, "T5580C": null, "T5582C": null, "C5589T": null, "T5592C": null, "T5594A": null, "C5598T": null, "C5601T": null, "A5603G": null, "A5604G": null, "A5606G": null, "A5606T": null, "C5607T": null, "C5607A": null, "A5609G": null, "A5609T": null, "A5612G": null, "G5702T": null, "T5704C": null, "C5707A": null, "C5707T": null, "T5710C": null, "G5724T": null, "C5731T": null, "C5734T": null, "C5739T": null, "C5743T": null, "G5748A": null, "C5754T": 0.0, "T5755A": 0.0, "G5763A": 0.0, "C5764T": 0.0, "C5777A": 0.0, "A5788T": 0.0, "C5812T": 0.0, "G6000C": 0.0, "G6003C": 0.04781699925661087, "G6003A": 0.0, "T6052A": 0.9907829761505127, "A6060G": 0.0, "G6382A": null, "C6430A": 0.0, "G6523A": 0.0, "A6569G": 0.0, "C6607T": 0.0, "T6651C": 0.0, "C6667T": 0.0, "A6675G": 0.0, "A6676G": 0.0, "C6781T": null, "G6900A": null, "C7024T": 0.0, "A7026G": 0.0, "C7127A": 0.4799390137195587, "A7177C": 0.0, "T7210A": 0.0, "G7216A": 0.4737670123577118, "A7219G": 0.009847999550402164, "C7249T": 0.4745660126209259, "G7323A": 0.0, "T7366C": null, "G7380A": null, "A7395G": null, "C7997T": 0.0, "C7998T": 0.0, "T8034C": 0.0, "C8078T": 0.9895780086517334, "C8096T": 0.0, "C8143A": 0.0, "A8160G": 0.0, "T8165C": 0.9966890215873718, "A8177G": 0.0, "A8183G": 0.0, "A8189G": 0.0, "C8190T": 0.0, "A8241G": 0.0, "A8269G": 0.0, "G8272A": 0.0, "A8326C": 0.0, "G8329A": 0.9895390272140503, "C8331T": 0.0, "G8346A": 0.0, "A8383G": 0.5607950091362, "C8384A": 0.5534089803695679, "C8418A": 0.0, "A8427G": 0.5185890197753906, "T8432G": 0.0, "A8640G": 0.0, "C8646T": 0.0, "A8670T": 0.0, "A8670C": 0.0, "G9018T": 0.0, "C9043T": 1.0, "G9048T": 0.0, "A9052G": 0.0, "A9066T": 0.0, "G9250A": 0.0, "A9277G": 0.0, "G9298A": 0.9886019825935364, "G9768A": 0.0, "C10015A": 0.0, "A10171G": 0.0, "C10301A": 0.0, "T10323C": 0.985988974571228, "C10848T": 0.0, "G10873T": 0.0, "A10890C": 0.0, "A11001G": 0.0, "G11019A": 0.0, "T11034A": 0.41855499148368835, "T11035G": 0.0, "G11190A": 0.0, "C11422T": 0.0, "C11422A": 0.0, "G11436A": 0.0, "C11475T": 0.0, "C11791T": 0.0, "A11844T": 0.0, "C11932T": 0.0, "A12101T": null, "A12111G": null, "G12206A": null, "C12549T": 0.0, "A12667G": 0.0, "C12804T": 0.0, "T12844A": 1.0, "G13467A": null, "A13488G": null, "A13514C": null, "C13540T": null, "T13601A": null, "A13687G": null, "G13692A": null, "A13699G": null, "A13705G": null, "G13723A": null, "G13735A": null, "C13849T": 0.0, "G13851T": 0.0, "T13870C": 0.0, "C13897T": 0.0, "C13918T": 0.0, "A13929G": 0.0, "A13929T": 0.0, "T13962C": 0.0, "A13983G": 0.0, "A14031G": 0.0, "A14040T": 0.0, "G14121C": 0.0, "T14326A": null, "G14331A": null, "C14356T": null, "T14359A": null, "A14381G": null, "A14391C": null, "G14416T": null, "G14571T": null, "C14582A": null, "T14709C": null, "A14722G": null, "A14736G": null, "C14737T": null, "A14841G": null, "G14881A": null}

Metadata

Date
2026-02-18
Location
Basel
Primer protocol
Eawag-2024-v542
Reference
RSV-A