LOC_0004N7Q.1

Submission details

Submission ID
15_2026_01_13H3
Submitting group
Date submitted
2026-02-16 10:43:36 UTC
Date released
2026-02-16 10:46:32 UTC

Frequencies

Amino acid mutation frequency
{"K2N": 0.999717, "L3I": 0.9972, "Q33R": 0.997734, "S45N": 0.998284, "T48I": 0.999292, "D53N": 0.99929, "E62G": 0.997589, "K83E": 0.999607, "K92R": 0.986352, "Y94N": 0.999576, "N96S": 0.998806, "L118P": 0.000644, "N121K": 0.999513, "D122N": 0.963674, "T131N": 0.991597, "R142G": 1.0, "N145S": 0.995833, "H156N": 1.0, "H156R": 0.959016, "K158E": 0.991803, "K158N": 0.991803, "F159I": 1.0, "F159Y": 1.0, "L164*": 1.0, "N171K": 1.0, "K173Q": 0.991935, "K173R": 0.983871, "V186D": 1.0, "N189S": 1.0, "N189K": 1.0, "D190N": 1.0, "I192F": 1.0, "F193S": 1.0, "Y195F": 1.0, "A198S": 1.0, "T212A": 1.0, "W234G": 0.002538, "I236L": 0.001083, "K276E": 0.996716, "N278K": 0.999111, "N312S": 0.999151, "K315R": 0.559687, "F332S": 0.001582, "I361R": 0.999231, "Q363R": 0.001159, "L367I": 0.001884, "T370N": 0.000433, "A373E": 0.000887, "I406V": null, "W421L": 0.003348, "R450K": 0.999047}
Nucleotide mutation frequency
{"A71C": 0.999717, "C72A": 0.9972, "A163G": 0.997734, "G199A": 0.998284, "C208T": 0.999292, "G222A": 0.99929, "A250G": 0.997589, "A312G": 0.999607, "A340G": 0.986352, "T345A": 0.999576, "A352G": 0.998806, "T418C": 0.000644, "C428A": 0.999513, "G429A": 0.963674, "C457A": 0.991597, "A489G": 1.0, "A499G": 0.995833, "C531A": 1.0, "A532G": 0.959016, "A537G": 0.991803, "A539C": 0.991803, "T540A": 1.0, "T541A": 1.0, "T556A": 1.0, "T578G": 1.0, "A582C": 0.991935, "A583G": 0.983871, "T622A": 1.0, "A631G": 1.0, "T632G": 1.0, "G633A": 1.0, "A639T": 1.0, "T643C": 1.0, "A649T": 1.0, "G657T": 1.0, "A699G": 1.0, "T765G": 0.002538, "A771C": 0.001083, "A891G": 0.996716, "T899G": 0.999111, "A1000G": 0.999151, "A1009G": 0.559687, "T1060C": 0.001582, "T1147G": 0.999231, "A1153G": 0.001159, "C1164A": 0.001884, "C1174A": 0.000433, "C1183A": 0.000887, "A1281G": null, "G1327T": 0.003348, "G1414A": 0.999047}

Metadata

Date
2026-01-13
Location
Basel (BS)
Primer protocol
EAWAG_11_24
Reference
H3