LOC_0004LG8.1

Submission details

Submission ID
D2_16_2026_01_17RSV-A
Submitting group
Date submitted
2026-02-16 10:40:15 UTC
Date released
2026-02-16 10:45:31 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": null, "N:S21C": null, "N:S32G": 0.0, "N:E55G": 0.0, "N:M67I": 0.0, "N:K84R": 0.6271370053291321, "N:I104V": 0.0, "N:L114S": 0.0, "N:E122D": 0.0, "N:P147S": 0.0, "N:D175V": 0.0, "N:S177L": 0.0, "N:M194I": 0.0, "N:N207T": 0.0, "N:N207S": 0.0, "N:Y216H": 0.0, "N:S231T": 0.0, "N:R338K": 0.0, "N:V352A": 1.0, "N:Y353C": 0.0, "N:L382I": 0.0, "N:V389I": 0.0, "P:E2D": 0.0,...
Nucleotide mutation frequency
{"A929G": null, "A1171T": null, "A1204G": 0.0, "A1274G": 0.0, "G1311T": 0.0, "A1361G": 0.6271370053291321, "A1420G": 0.0, "T1451C": 0.0, "A1476C": 0.0, "C1549T": 0.0, "G1584A": 0.0, "G1584T": 0.07127600163221359, "A1634T": 0.0, "C1640T": 0.0, "G1692A": 0.0, "A1730C": 0.0, "A1730G": 0.0, "T1756C": 0.0, "T1801A": 0.0, "G2123A": 0.0, "T2165C": 1.0, "A2168G": 0.0, "C2254A": 0.0, "G2275A": 0.0, "A2323C": 0.0, "C2367T": 0.0, "T2416A": 0.0, "T2481C": 0.9826840162277222, "T2495C": 0.0, "T2502C": 0.0, "C2523T": 0.0, "C2532A": 0.0, "G2534A": 0.0, "A2544G": 0.0, "C2592T": 0.0, "G2897A": null, "A3034T": 0.0, "A3299G": 0.0, "G3354A": 0.0, "C3355G": 0.0, "T3365A": 0.0, "G3382T": 0.0, "T3389C": 0.0, "A3407C": 0.0, "A3442C": 0.0, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3551T": 0.0, "G3616T": 0.0, "G3616C": 0.0, "G3616A": 0.0, "G3682A": 0.0, "G3697A": 0.0, "T3701C": 0.0, "A3751T": 0.0, "A3766G": 0.0, "C3845T": 0.0, "A3925G": 0.0, "T3971C": 0.0, "T4368A": 0.0, "G4399A": 1.0, "G4410A": 0.0, "T4411C": 0.0, "G4447A": null, "T4655G": null, "A4660C": null, "C4662T": null, "A4665T": null, "G4674A": null, "G4679A": null, "A4775G": 0.0, "A4784G": 0.0, "G4820A": 0.0, "C4821T": 0.0, "C4850A": 0.0, "C4863T": 1.0, "A4879G": 0.0, "C4917T": 0.0, "C4919T": 0.980663001537323, "A4925T": 0.0, "T4941C": 0.0, "G4950A": 0.0, "C4952T": 1.0, "T4955A": 0.0, "G4967A": 0.0, "C4974T": 0.0, "C4989T": 1.0, "T4992C": 0.0, "A4993G": 0.0, "T4995C": 0.0, "C4998T": 0.0, "T5000C": 0.0, "C5004T": 0.0, "C5009A": 0.0, "C5010T": 0.0, "C5016T": 0.0, "G5018A": 0.0, "T5021C": 0.0, "C5027T": 0.0, "T5043A": 1.0, "A5048G": 0.0, "T5052A": 1.0, "A5057G": 0.0, "A5060G": 0.0, "A5066G": 0.0, "C5069A": 0.0, "T5076C": 0.0, "C5079T": 0.0, "G5082T": null, "G5103A": null, "A5183G": 0.05687199905514717, "A5184G": 0.05213300138711929, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "A5246G": 0.0, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "A5289G": 0.0, "G5291A": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301A": 0.0, "C5310T": 0.0, "A5313G": 0.0, "C5316T": 0.0, "G5322A": 0.9942860007286072, "G5322T": 0.0, "T5325C": 0.9276189804077148, "C5327T": 0.0, "C5334T": 0.0, "A5337G": 0.0, "C5339A": 0.0, "C5340T": 0.0, "A5342G": 0.0, "C5352T": 0.9333329796791077, "A5375G": 0.0, "G5379T": 1.0, "C5380A": 0.0, "A5384G": 0.06297700107097626, "C5390A": 0.0, "T5391C": 0.9369019865989685, "C5393A": 0.0, "C5397T": 0.0, "T5399A": 0.0, "A5408C": 0.0, "G5412A": 0.0, "C5418T": 0.0, "C5425A": 0.0700640007853508, "A5435G": 0.977707028388977, "C5442T": 0.0, "A5444C": 0.9903849959373474, "A5444T": 0.0, "A5448T": 0.07051300257444382, "T5450C": 0.0, "T5459C": 0.0, "C5460T": 0.0, "G5462A": 0.0, "G5465A": 0.0, "G5466A": 0.0, "T5468C": 0.0, "C5472T": null, "C5477T": null, "C5478T": null, "G5486A": null, "T5489C": null, "T5498C": null, "A5502G": null, "A5512T": 0.0, "C5516T": 0.0, "C5516A": 0.0, "A5528G": 0.9905970096588135, "T5531C": 0.0, "G5534A": 0.0, "A5535T": 0.0, "G5537A": 0.0, "T5540C": 0.0, "C5543T": 0.0, "C5544T": 0.999413013458252, "G5547T": 0.0, "G5547A": 0.0, "C5549T": 0.0, "C5550T": 0.0, "G5558A": 0.0, "T5559C": 0.0, "T5561C": 0.0, "C5568T": 0.0, "G5573A": 0.0, "A5574G": 0.0, "T5580C": 0.0, "T5582C": 0.0, "C5589T": 0.0, "T5592C": 0.0, "C5598T": 0.0, "C5601T": 0.0, "A5603G": 0.0, "A5604G": 0.0, "A5606T": 0.0, "C5607A": 0.0, "C5607T": 0.0, "A5609T": 0.0, "A5609G": 0.0, "A5612G": 0.0, "T5704C": 0.0, "T5710C": 0.0, "G5724T": 0.0, "C5731T": 0.998645007610321, "C5734T": 0.0, "C5743T": 0.0, "G5748A": 0.0, "C5754T": 0.0, "G5763A": 0.9985870122909546, "C5764T": 0.0, "A5788T": 0.0, "C5812T": 0.0, "G6000C": null, "G6003C": null, "G6003A": null, "A6060G": null, "C6430A": null, "G6523A": null, "A6569G": null, "C6607T": null, "T6651C": null, "C6667T": null, "A6675G": null, "A6676G": null, "G6900A": null, "C7024T": null, "A7026G": null, "T7210A": null, "A7219G": null, "C7249T": null, "T7366C": 0.0, "A7395G": 0.0, "C7997T": null, "C7998T": null, "T8034C": null, "C8143A": null, "A8160G": null, "T8165C": null, "A8177G": null, "A8183G": null, "A8189G": null, "C8190T": null, "A8241G": null, "A8269G": null, "G8272A": null, "G8329A": null, "C8331T": null, "G8346A": null, "A8383G": null, "C8384A": null, "A8427G": null, "T8432G": null, "A8640G": null, "C8646T": null, "A8670T": null, "A8670C": null, "C9043T": null, "A9066T": null, "G9250A": null, "A9277G": null, "G9298A": null, "G9768A": null, "C10015A": null, "A10171G": null, "C10301A": null, "T10323C": null, "C10848T": null, "G10873T": null, "A10890C": null, "A11001G": null, "G11019A": null, "T11034A": null, "G11190A": null, "G11436A": 0.0, "C11475T": 0.0, "C11791T": null, "C11932T": null, "A12101T": null, "G12206A": null, "C12549T": null, "A12667G": null, "C12804T": null, "T12844A": null, "G13467A": null, "A13514C": null, "C13540T": null, "T13601A": null, "G13692A": null, "A13699G": null, "A13705G": null, "G13723A": null, "C13849T": 0.9190599918365479, "T13870C": 0.0, "C13897T": 0.0, "A13929T": 0.0, "A13929G": 0.0, "T13962C": 0.0, "A13983G": 0.0, "A14031G": 0.0, "A14040T": 0.0, "G14121C": 0.0, "T14326A": 0.0, "G14331A": 0.0, "C14356T": 0.0, "T14359A": 0.0, "A14381G": 0.0, "A14391C": 0.0, "G14416T": 0.0, "G14571T": 0.0, "C14582A": 0.0, "T14709C": null, "A14722G": null, "A14736G": 1.0, "C14737T": 0.0, "G14881A": null}

Metadata

Date
2026-01-17
Location
Geneva
Primer protocol
Eawag-2024-v542
Reference
RSV-A