LOC_0004L9N.1

Submission details

Submission ID
B1_05_2026_01_16RSV-A
Submitting group
Date submitted
2026-02-16 10:40:15 UTC
Date released
2026-02-16 10:45:31 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": null, "N:S21C": null, "N:S32G": null, "N:E55G": null, "N:M67I": null, "N:K84R": null, "N:I104V": null, "N:L114S": null, "N:E122D": null, "N:P147S": null, "N:D175V": null, "N:S177L": null, "N:M194I": null, "N:N207T": null, "N:N207S": null, "N:Y216H": null, "N:S231T": null, "N:R338K": null, "N:V352A": null, "N:Y353C": null, "N:L382I": null, "N:V389I": null, "P:E2D": null,...
Nucleotide mutation frequency
{"A929G": null, "A1171T": null, "A1204G": null, "A1274G": null, "G1311T": null, "A1361G": null, "A1420G": null, "T1451C": null, "A1476C": null, "C1549T": null, "G1584A": null, "G1584T": null, "A1634T": null, "C1640T": null, "G1692A": null, "A1730C": null, "A1730G": null, "T1756C": null, "T1801A": null, "G2123A": null, "T2165C": null, "A2168G": null, "C2254A": null, "G2275A": null, "A2323C": null, "C2367T": null, "T2416A": null, "T2481C": 0.9934750199317932, "T2495C": 0.0, "T2502C": 0.0, "C2523T": 0.0, "C2532A": 0.0, "G2534A": 0.0, "A2544G": 0.0, "C2592T": 0.490682989358902, "G2897A": null, "A3034T": 0.0, "A3299G": 0.0, "G3354A": null, "C3355G": null, "T3365A": null, "G3382T": null, "T3389C": null, "A3407C": null, "A3442C": null, "A3518G": null, "C3545T": null, "C3548T": null, "C3551T": null, "G3616T": 0.0, "G3616C": 0.0, "G3616A": 0.0, "G3682A": 0.0, "G3697A": 0.0, "T3701C": 0.0, "A3751T": 0.0, "A3766G": 0.0, "C3845T": 0.0, "A3925G": 0.0, "T3971C": 0.0, "T4368A": 0.0, "G4399A": 0.0, "G4410A": 0.0, "T4411C": 0.0, "G4447A": 0.0, "T4655G": 0.0, "A4660C": 0.0, "C4662T": 0.0, "A4665T": 0.0, "G4674A": 0.0, "G4679A": 0.0, "A4775G": 0.0, "A4784G": 0.0, "G4820A": 0.0, "C4821T": 0.0, "C4850A": 0.32270899415016174, "C4863T": 0.9987829923629761, "A4879G": 0.0, "C4917T": 0.0, "C4919T": 0.994005024433136, "A4925T": 0.0, "T4941C": 0.0, "G4950A": 0.0, "C4952T": 1.0, "T4955A": 0.0, "G4967A": 0.3274340033531189, "C4974T": 0.0, "C4989T": 1.0, "T4992C": 0.0, "A4993G": 0.0, "T4995C": 0.0, "C4998T": 0.0, "T5000C": 0.0, "C5004T": 0.0, "C5009A": 0.0, "C5010T": 0.0, "C5016T": 0.0, "G5018A": 0.0, "T5021C": 0.0, "C5027T": 0.6598979830741882, "T5043A": 0.9948319792747498, "A5048G": 0.0, "T5052A": 1.0, "A5057G": 0.0, "A5060G": 0.0, "A5066G": 0.0, "C5069A": 0.6631019711494446, "T5076C": 0.0, "C5079T": 0.0, "G5082T": null, "G5103A": null, "A5183G": 0.14700999855995178, "A5184G": 0.14700999855995178, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "A5246G": 0.0, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "A5289G": 0.0, "G5291A": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301A": 0.0, "C5310T": 0.0, "A5313G": 0.1372690051794052, "C5316T": 0.0, "G5322A": 0.16678600013256073, "G5322T": 0.7918040156364441, "T5325C": 0.0, "C5327T": 0.0, "C5334T": 0.0, "A5337G": 0.0, "C5339A": 0.0, "C5340T": 0.0, "A5342G": 0.0, "C5352T": 0.0, "A5375G": 0.0, "G5379T": 0.9995700120925903, "C5380A": 0.0, "A5384G": 0.0, "C5390A": 0.0, "T5391C": 0.0, "C5393A": 0.0, "C5397T": 0.0, "T5399A": 0.0, "A5408C": 0.0, "G5412A": 0.0, "C5418T": 0.0, "C5425A": 0.13881200551986694, "A5435G": 0.9832950234413147, "C5442T": 0.0, "A5444C": 0.9903749823570251, "A5444T": 0.0, "A5448T": 0.13753800094127655, "T5450C": 0.0, "T5459C": 0.0, "C5460T": 0.0, "G5462A": 0.0, "G5465A": 0.0, "G5466A": 0.0, "T5468C": 0.0, "C5472T": null, "C5477T": null, "C5478T": null, "G5486A": null, "T5489C": null, "T5498C": null, "A5502G": null, "A5512T": 0.0, "C5516T": 0.0, "C5516A": 0.0, "A5528G": 0.0, "T5531C": 0.0, "G5534A": 0.0, "A5535T": 0.0, "G5537A": 0.0, "T5540C": 0.9953870177268982, "C5543T": 0.0, "C5544T": 0.0, "G5547T": 0.0, "G5547A": 0.9997619986534119, "C5549T": 0.0, "C5550T": 0.0, "G5558A": 0.0, "T5559C": 0.0, "T5561C": 0.0, "C5568T": 0.0, "G5573A": 0.0, "A5574G": 0.0, "T5580C": 0.9787499904632568, "T5582C": 0.9991340041160583, "C5589T": 0.0, "T5592C": 0.993162989616394, "C5598T": 0.0, "C5601T": 0.0, "A5603G": 0.0, "A5604G": 0.0, "A5606T": 0.0, "C5607A": 0.0, "C5607T": 0.0, "A5609T": 0.0, "A5609G": 0.0, "A5612G": 0.0, "T5704C": 0.0, "T5710C": 0.0, "G5724T": 0.0, "C5731T": 0.9991289973258972, "C5734T": 0.0, "C5743T": 0.0, "G5748A": 0.0, "C5754T": 0.0, "G5763A": 0.0, "C5764T": 0.0, "A5788T": 0.0, "C5812T": 0.0, "G6000C": 0.0, "G6003C": 0.0, "G6003A": 0.0, "A6060G": 0.0, "C6430A": 0.0, "G6523A": 0.0, "A6569G": 0.0, "C6607T": 0.0, "T6651C": 0.0, "C6667T": 0.0, "A6675G": 0.0, "A6676G": 0.0, "G6900A": null, "C7024T": 1.0, "A7026G": 0.0, "T7210A": 0.0, "A7219G": 0.027712000533938408, "C7249T": 0.0, "T7366C": null, "A7395G": null, "C7997T": null, "C7998T": null, "T8034C": null, "C8143A": null, "A8160G": null, "T8165C": null, "A8177G": null, "A8183G": null, "A8189G": null, "C8190T": null, "A8241G": null, "A8269G": null, "G8272A": null, "G8329A": null, "C8331T": null, "G8346A": null, "A8383G": null, "C8384A": null, "A8427G": null, "T8432G": null, "A8640G": null, "C8646T": null, "A8670T": null, "A8670C": null, "C9043T": 0.0, "A9066T": 0.0, "G9250A": 0.0, "A9277G": 0.04159099981188774, "G9298A": 0.9836959838867188, "G9768A": 0.0, "C10015A": null, "A10171G": 0.0, "C10301A": 0.0, "T10323C": 0.968936026096344, "C10848T": 0.0, "G10873T": 0.0, "A10890C": 0.0, "A11001G": 0.0, "G11019A": 0.0, "T11034A": 0.0, "G11190A": null, "G11436A": 0.0, "C11475T": 0.0, "C11791T": null, "C11932T": null, "A12101T": 0.9942200183868408, "G12206A": 0.0, "C12549T": 0.0, "A12667G": 0.0, "C12804T": 0.0, "T12844A": null, "G13467A": null, "A13514C": null, "C13540T": null, "T13601A": null, "G13692A": null, "A13699G": null, "A13705G": null, "G13723A": null, "C13849T": null, "T13870C": null, "C13897T": null, "A13929T": null, "A13929G": null, "T13962C": null, "A13983G": null, "A14031G": null, "A14040T": null, "G14121C": null, "T14326A": null, "G14331A": null, "C14356T": null, "T14359A": null, "A14381G": null, "A14391C": null, "G14416T": null, "G14571T": null, "C14582A": null, "T14709C": null, "A14722G": null, "A14736G": null, "C14737T": null, "G14881A": null}

Metadata

Date
2026-01-16
Location
Lugano
Primer protocol
Eawag-2024-v542
Reference
RSV-A