LOC_0004L7S.1

Submission details

Submission ID
A2_15_2026_01_13RSV-A
Submitting group
Date submitted
2026-02-16 10:40:15 UTC
Date released
2026-02-16 10:45:31 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": 0.0, "N:S21C": 0.0, "N:S32G": 0.0, "N:E55G": 0.0, "N:M67I": 0.0, "N:K84R": 0.9969720244407654, "N:I104V": 0.0, "N:L114S": 0.0, "N:E122D": 0.0, "N:P147S": 0.0, "N:D175V": 0.0, "N:S177L": 0.0, "N:M194I": 0.0, "N:N207T": 0.0, "N:N207S": 0.0, "N:Y216H": 0.0, "N:S231T": 0.47707098722457886, "N:R338K": 0.0, "N:V352A": 0.9993159770965576, "N:Y353C": 0.0, "N:L382I": 0.0,...
Nucleotide mutation frequency
{"A929G": 0.0, "A1171T": 0.0, "A1204G": 0.0, "A1274G": 0.0, "G1311T": 0.0, "A1361G": 0.9969720244407654, "A1420G": 0.0, "T1451C": 0.0, "A1476C": 0.0, "C1549T": 0.0, "G1584A": 0.0, "G1584T": 0.07152800261974335, "A1634T": 0.0, "C1640T": 0.0, "G1692A": 0.0, "A1730C": 0.0, "A1730G": 0.0, "T1756C": 0.0, "T1801A": 0.47707098722457886, "G2123A": 0.0, "T2165C": 0.9993159770965576, "A2168G": 0.0, "C2254A": 0.0, "G2275A": 0.0, "A2323C": 0.0, "C2367T": 0.0, "T2416A": 0.0, "T2481C": 0.9918699860572815, "T2495C": 0.0, "T2502C": 0.9911069869995117, "C2523T": 0.0, "C2532A": 0.0, "G2534A": 0.0, "A2544G": 0.0, "C2592T": 0.0, "G2897A": null, "A3034T": 1.0, "A3299G": 0.0, "G3354A": 0.0, "C3355G": 0.0, "T3365A": 0.0, "G3382T": 0.0, "T3389C": 0.0, "A3407C": 0.0, "A3442C": 0.9902830123901367, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3551T": 0.0, "G3616T": 0.0, "G3616C": 0.0, "G3616A": 0.0, "G3682A": 0.0, "G3697A": 0.0, "T3701C": 0.0, "A3751T": 0.0, "A3766G": 0.0, "C3845T": 0.0, "A3925G": 0.0, "T3971C": 0.0, "T4368A": 0.0, "G4399A": 0.0, "G4410A": 0.0, "T4411C": 0.0, "G4447A": null, "T4655G": null, "A4660C": null, "C4662T": null, "A4665T": null, "G4674A": null, "G4679A": null, "A4775G": null, "A4784G": null, "G4820A": null, "C4821T": null, "C4850A": null, "C4863T": null, "A4879G": null, "C4917T": null, "C4919T": null, "A4925T": null, "T4941C": null, "G4950A": null, "C4952T": null, "T4955A": null, "G4967A": null, "C4974T": null, "C4989T": null, "T4992C": null, "A4993G": null, "T4995C": null, "C4998T": null, "T5000C": null, "C5004T": null, "C5009A": null, "C5010T": null, "C5016T": null, "G5018A": null, "T5021C": null, "C5027T": null, "T5043A": null, "A5048G": null, "T5052A": null, "A5057G": null, "A5060G": null, "A5066G": null, "C5069A": null, "T5076C": null, "C5079T": null, "G5082T": null, "G5103A": null, "A5183G": 0.0, "A5184G": 0.0, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "A5246G": 0.0, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "A5289G": 0.0, "G5291A": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301A": 0.0, "C5310T": 0.0, "A5313G": 0.9676070213317871, "C5316T": 0.0, "G5322A": 0.0, "G5322T": 0.9845749735832214, "T5325C": 0.9959229826927185, "C5327T": 0.9933890104293823, "C5334T": 0.0, "A5337G": 0.0, "C5339A": 0.0, "C5340T": 0.0, "A5342G": 0.0, "C5352T": 0.0, "A5375G": 0.0, "G5379T": 0.9968559741973877, "C5380A": 0.0, "A5384G": 0.0, "C5390A": 0.0, "T5391C": 0.0, "C5393A": 0.0, "C5397T": 0.0, "T5399A": 0.0, "A5408C": 0.0, "G5412A": 0.0, "C5418T": 0.0, "C5425A": 0.0, "A5435G": 0.9770190119743347, "C5442T": 0.0, "A5444C": 0.986316978931427, "A5444T": 0.0, "A5448T": 0.0, "T5450C": 0.0, "T5459C": 0.38569799065589905, "C5460T": 0.0, "G5462A": 0.0, "G5465A": 0.0, "G5466A": 0.0, "T5468C": 0.3797299861907959, "C5472T": 0.0, "C5477T": 0.0, "C5478T": 0.0, "G5486A": 0.0, "T5489C": 0.0, "T5498C": 0.0, "A5502G": 0.9950429797172546, "A5512T": 0.0, "C5516T": 0.0, "C5516A": 0.0, "A5528G": 0.0, "T5531C": 0.0, "G5534A": 0.0, "A5535T": 0.0, "G5537A": 0.0, "T5540C": 0.0, "C5543T": 0.0, "C5544T": 0.0, "G5547T": 0.0, "G5547A": 0.0, "C5549T": 0.0, "C5550T": 0.0, "G5558A": 0.0, "T5559C": 0.9988110065460205, "T5561C": 0.0, "C5568T": 0.0, "G5573A": 0.0, "A5574G": 0.0, "T5580C": 0.97980797290802, "T5582C": 0.0, "C5589T": 0.0, "T5592C": 0.0, "C5598T": 0.0, "C5601T": 0.0, "A5603G": 0.0, "A5604G": 0.0, "A5606T": 0.0, "C5607A": 0.0, "C5607T": 0.9984490275382996, "A5609T": 0.0, "A5609G": 0.9988229870796204, "A5612G": 0.0, "T5704C": 0.0, "T5710C": 0.0, "G5724T": 0.0, "C5731T": 0.0, "C5734T": 0.0, "C5743T": 0.0, "G5748A": 0.0, "C5754T": 0.0, "G5763A": 0.0, "C5764T": 0.0, "A5788T": 0.0, "C5812T": 0.0, "G6000C": 0.0, "G6003C": 0.0, "G6003A": 0.0, "A6060G": 0.0, "C6430A": 0.0, "G6523A": 0.0, "A6569G": 0.0, "C6607T": 0.0, "T6651C": 0.0, "C6667T": 0.0, "A6675G": 0.0, "A6676G": 0.0, "G6900A": null, "C7024T": 0.0, "A7026G": 0.0, "T7210A": 0.0, "A7219G": 0.026465000584721565, "C7249T": 0.0, "T7366C": null, "A7395G": null, "C7997T": null, "C7998T": null, "T8034C": null, "C8143A": null, "A8160G": null, "T8165C": null, "A8177G": null, "A8183G": null, "A8189G": null, "C8190T": null, "A8241G": null, "A8269G": null, "G8272A": null, "G8329A": null, "C8331T": null, "G8346A": null, "A8383G": null, "C8384A": null, "A8427G": null, "T8432G": null, "A8640G": null, "C8646T": null, "A8670T": null, "A8670C": null, "C9043T": null, "A9066T": null, "G9250A": null, "A9277G": null, "G9298A": null, "G9768A": null, "C10015A": null, "A10171G": null, "C10301A": null, "T10323C": null, "C10848T": null, "G10873T": null, "A10890C": null, "A11001G": null, "G11019A": null, "T11034A": null, "G11190A": 0.0, "G11436A": 0.0, "C11475T": null, "C11791T": null, "C11932T": null, "A12101T": null, "G12206A": null, "C12549T": 0.0, "A12667G": null, "C12804T": null, "T12844A": null, "G13467A": null, "A13514C": null, "C13540T": null, "T13601A": null, "G13692A": null, "A13699G": null, "A13705G": null, "G13723A": null, "C13849T": 0.0, "T13870C": 0.0, "C13897T": 0.0, "A13929T": 0.0, "A13929G": 0.0, "T13962C": 0.0, "A13983G": 0.0, "A14031G": 0.0, "A14040T": 0.0, "G14121C": 0.0, "T14326A": 0.0, "G14331A": 0.0, "C14356T": 0.0, "T14359A": 0.0, "A14381G": 0.0, "A14391C": 0.0, "G14416T": 0.0, "G14571T": 0.0, "C14582A": 0.0, "T14709C": 0.0, "A14722G": 1.0, "A14736G": 1.0, "C14737T": 0.0, "G14881A": 0.0}

Metadata

Date
2026-01-13
Location
Basel
Primer protocol
Eawag-2024-v542
Reference
RSV-A