LOC_0004H41.1

Submission details

Submission ID
E1_17_2025_12_31RSV-A
Submitting group
Date submitted
2026-02-03 11:49:49 UTC
Date released
2026-02-03 11:56:19 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": 0.0, "N:S21C": 0.0, "N:S32G": 0.0, "N:E55G": null, "N:M67I": null, "N:K84R": null, "N:L114S": null, "N:P147S": 0.0, "N:D175V": 0.0, "N:S177L": 0.0, "N:M194I": 0.0, "N:N207S": 0.9982960224151611, "N:N207T": 0.0, "N:Y216H": 0.0, "N:R338K": 0.0, "N:V352A": 1.0, "N:Y353C": 0.0, "N:L382I": 0.0, "N:V389I": 0.0, "P:E2D": 0.0, "P:A17V": 0.0, "P:L55P": null, "P:S60P": null,...
Nucleotide mutation frequency
{"A929G": 0.0, "A1171T": 0.0, "A1204G": 0.0, "A1274G": null, "G1311T": null, "A1361G": null, "T1451C": null, "C1549T": 0.0, "G1584A": 0.0, "G1584T": 0.06255199760198593, "A1634T": 0.0, "C1640T": 0.0, "G1692A": 0.0, "A1730G": 0.9982960224151611, "A1730C": 0.0, "T1756C": 0.0, "G2123A": 0.0, "T2165C": 1.0, "A2168G": 0.0, "C2254A": 0.0, "G2275A": 0.0, "A2323C": 0.0, "C2367T": 0.0, "T2481C": null, "T2495C": null, "T2502C": null, "C2523T": null, "C2532A": null, "G2534A": null, "A2544G": null, "C2592T": null, "G2897A": null, "A3299G": 0.0, "G3354A": 0.5235520005226135, "C3355G": 0.0, "T3365A": 0.0, "G3382T": 0.0, "T3389C": 0.0, "A3407C": 0.0, "A3442C": 0.0, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3551T": 0.0, "G3616C": 0.07326699793338776, "G3616A": 0.11485099792480469, "G3616T": 0.0, "G3682A": null, "G3697A": null, "T3701C": null, "A3751T": null, "A3766G": null, "C3845T": null, "A3925G": null, "T4368A": null, "G4410A": 0.9989089965820312, "T4411C": 0.0, "T4655G": 0.0788009986281395, "A4660C": 0.0, "C4662T": 0.0, "A4665T": 0.0, "G4674A": 0.0, "G4679A": 0.0, "A4775G": 0.0057470002211630344, "G4820A": 0.0, "C4821T": 0.0, "C4850A": 0.0, "C4863T": 1.0, "A4879G": 0.0, "C4917T": 0.0, "C4919T": 0.9944509863853455, "T4941C": 0.0, "G4950A": 0.0, "C4952T": 0.9988579750061035, "T4955A": 0.0, "G4967A": 0.0, "C4974T": 0.0, "C4989T": 0.0, "T4992C": 0.0, "A4993G": 0.0, "T4995C": 0.0, "C4998T": 0.0, "T5000C": 0.0, "C5004T": 1.0, "C5009A": 0.0, "C5010T": 0.0, "C5027T": 0.0, "T5043A": 0.0, "T5052A": 0.9995440244674683, "A5057G": 0.0, "A5060G": 0.0, "A5066G": 0.0, "T5076C": 0.9941650032997131, "C5079T": 0.0, "G5082T": 0.0, "G5103A": 0.0, "A5183G": 0.0, "A5184G": 0.0, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "A5246G": 0.0, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301A": 0.0, "C5310T": 0.0, "A5313G": 0.0, "C5316T": 0.9977589845657349, "G5322T": 0.0, "G5322A": 0.9953070282936096, "T5325C": 0.0, "C5327T": 0.0, "C5334T": 0.0, "A5337G": 0.0, "C5339A": 0.0, "C5340T": 0.0, "A5342G": 0.0, "C5352T": 0.0, "A5375G": 0.0, "G5379T": 0.9994270205497742, "C5380A": 0.0, "A5384G": 0.0, "C5390A": 0.0, "T5391C": 0.0, "C5393A": 0.0, "C5397T": 0.0, "T5399A": 0.0, "A5408C": 0.0, "G5412A": 0.9991999864578247, "C5418T": 0.0, "C5425A": 0.0, "A5435G": 0.9959869980812073, "C5442T": 0.0, "A5444T": 0.0, "A5444C": 0.9931700229644775, "A5448T": 0.0, "T5450C": 0.0, "T5459C": 0.0, "G5462A": 0.0, "G5465A": 0.0, "G5466A": 0.0, "T5468C": 0.0, "C5472T": null, "C5477T": null, "C5478T": null, "G5486A": null, "T5489C": null, "T5498C": null, "A5502G": null, "A5512T": null, "T5531C": null, "A5535T": null, "T5540C": null, "C5543T": null, "C5544T": null, "G5547T": null, "G5547A": null, "G5558A": null, "T5559C": null, "T5561C": null, "C5568T": null, "G5573A": null, "A5574G": null, "T5580C": null, "T5582C": null, "C5589T": null, "T5592C": null, "C5598T": null, "C5601T": null, "A5606T": null, "C5607T": null, "C5607A": null, "A5609G": null, "A5612G": null, "T5704C": null, "C5731T": null, "C5734T": null, "C5743T": null, "G5748A": null, "C5754T": null, "G5763A": null, "A5788T": null, "G6003A": null, "A6060G": null, "C6430A": null, "G6523A": null, "A6569G": null, "C6607T": null, "A6675G": null, "A6676G": null, "G6900A": null, "A7026G": null, "T7210A": null, "A7219G": null, "C7249T": null, "A7395G": null, "C7997T": 0.0, "T8034C": 0.0, "C8143A": 0.0, "A8160G": 0.0, "T8165C": 0.9974910020828247, "A8177G": 0.0, "A8183G": 0.0, "A8189G": 0.0, "A8269G": 0.9975060224533081, "G8272A": 0.0, "G8329A": 1.0, "G8346A": null, "A8383G": null, "C8384A": null, "A8427G": null, "T8432G": null, "A8640G": null, "A8670T": null, "A8670C": null, "C9043T": null, "A9066T": null, "G9250A": null, "G9298A": null, "G9768A": 0.0, "C10015A": null, "A10171G": 0.0, "C10301A": 0.0, "T10323C": 0.9883720278739929, "C10848T": null, "G10873T": null, "A10890C": null, "A11001G": null, "G11019A": null, "T11034A": null, "G11190A": null, "G11436A": null, "C11475T": null, "C11791T": null, "C11932T": null, "A12101T": null, "C12549T": null, "A12667G": null, "C13849T": null, "C13897T": null, "A13929G": null, "A13929T": null, "A13983G": null, "A14040T": null, "G14121C": null, "G14331A": null, "C14356T": null, "T14359A": null, "A14381G": null, "A14391C": null, "G14416T": null, "G14571T": null, "C14582A": null, "T14709C": null, "A14722G": null, "A14736G": null, "C14737T": null, "G14881A": null}

Metadata

Date
2025-12-31
Location
Chur
Primer protocol
Eawag-2024-v542
Reference
RSV-A