LOC_0004H25.1

Submission details

Submission ID
D2_16_2026_01_04RSV-A
Submitting group
Date submitted
2026-02-03 11:49:49 UTC
Date released
2026-02-03 11:56:19 UTC

Frequencies

Amino acid mutation frequency
{"NS2:T111A": 0.0, "N:S21C": 0.0, "N:S32G": 0.0, "N:E55G": 0.0, "N:M67I": 0.0, "N:K84R": 0.9954299926757812, "N:L114S": 0.0, "N:P147S": 0.0, "N:D175V": 0.0, "N:S177L": 0.0, "N:M194I": 0.0, "N:N207S": 0.0, "N:N207T": 0.0, "N:Y216H": 0.5149049758911133, "N:R338K": 0.0, "N:V352A": 0.9977800250053406, "N:Y353C": 0.0, "N:L382I": 0.0, "N:V389I": 0.0, "P:E2D": 0.2609660029411316,...
Nucleotide mutation frequency
{"A929G": 0.0, "A1171T": 0.0, "A1204G": 0.0, "A1274G": 0.0, "G1311T": 0.0, "A1361G": 0.9954299926757812, "T1451C": 0.0, "C1549T": 0.0, "G1584A": 0.0, "G1584T": 0.07253599911928177, "A1634T": 0.0, "C1640T": 0.0, "G1692A": 0.0, "A1730G": 0.0, "A1730C": 0.0, "T1756C": 0.5149049758911133, "G2123A": 0.0, "T2165C": 0.9977800250053406, "A2168G": 0.0, "C2254A": 0.0, "G2275A": 0.0, "A2323C": 0.2609660029411316, "C2367T": 0.0, "T2481C": 0.9877679944038391, "T2495C": 0.0, "T2502C": 0.9968249797821045, "C2523T": 0.0, "C2532A": 0.0, "G2534A": 0.0, "A2544G": 0.0, "C2592T": 0.0, "G2897A": null, "A3299G": 0.0, "G3354A": 0.0, "C3355G": 0.2812789976596832, "T3365A": 0.340052992105484, "G3382T": 0.0, "T3389C": 0.0, "A3407C": 0.0, "A3442C": 0.3328160047531128, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3551T": 0.0, "G3616C": 0.0, "G3616A": 0.0, "G3616T": 0.0, "G3682A": 0.0, "G3697A": 0.0, "T3701C": 0.0, "A3751T": 0.0, "A3766G": 0.0, "C3845T": 0.0, "A3925G": 0.0, "T4368A": null, "G4410A": 0.0, "T4411C": 0.0, "T4655G": 0.0, "A4660C": 0.9938079714775085, "C4662T": 0.0, "A4665T": 0.0, "G4674A": 0.0, "G4679A": 0.0, "A4775G": 0.0, "G4820A": null, "C4821T": null, "C4850A": 0.0, "C4863T": 1.0, "A4879G": 0.0, "C4917T": 0.0, "C4919T": 1.0, "T4941C": 0.0, "G4950A": 0.0, "C4952T": null, "T4955A": null, "G4967A": null, "C4974T": null, "C4989T": null, "T4992C": null, "A4993G": null, "T4995C": null, "C4998T": null, "T5000C": null, "C5004T": null, "C5009A": null, "C5010T": null, "C5027T": null, "T5043A": null, "T5052A": null, "A5057G": null, "A5060G": null, "A5066G": null, "T5076C": null, "C5079T": null, "G5082T": null, "G5103A": null, "A5183G": 0.9926739931106567, "A5184G": 0.9780219793319702, "A5187G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "A5246G": 0.02508999966084957, "C5268A": 0.0, "C5273T": 0.0, "A5277G": 0.0, "A5279G": 0.0, "C5295T": 0.0, "A5298G": 0.0, "C5301A": 0.0, "C5310T": 0.0, "A5313G": 0.0, "C5316T": 0.0, "G5322T": 0.0, "G5322A": 0.9832900166511536, "T5325C": 0.0, "C5327T": 0.0, "C5334T": 0.0, "A5337G": 0.0, "C5339A": 0.0, "C5340T": 0.0, "A5342G": 0.0, "C5352T": 0.0, "A5375G": 0.0, "G5379T": 1.0, "C5380A": 0.0, "A5384G": 0.9961439967155457, "C5390A": 0.0, "T5391C": 0.0, "C5393A": 0.0, "C5397T": 0.0, "T5399A": 0.0, "A5408C": 0.0, "G5412A": 0.0, "C5418T": 0.0, "C5425A": 0.9960399866104126, "A5435G": 0.9920790195465088, "C5442T": 0.0, "A5444T": 0.0, "A5444C": 0.9900789856910706, "A5448T": 0.9980159997940063, "T5450C": 0.0, "T5459C": 0.0, "G5462A": 0.0, "G5465A": 0.0, "G5466A": 0.0, "T5468C": 0.0, "C5472T": null, "C5477T": null, "C5478T": null, "G5486A": null, "T5489C": null, "T5498C": null, "A5502G": null, "A5512T": 0.0, "T5531C": 0.0, "A5535T": 0.0, "T5540C": 0.0, "C5543T": 0.0, "C5544T": 0.0, "G5547T": 0.334214985370636, "G5547A": 0.0, "G5558A": 0.0, "T5559C": 0.0, "T5561C": 0.0, "C5568T": 0.0, "G5573A": 0.0, "A5574G": 0.0, "T5580C": 0.0, "T5582C": 0.0, "C5589T": 0.0, "T5592C": 0.0, "C5598T": 0.0, "C5601T": 0.0, "A5606T": 0.0, "C5607T": 0.0, "C5607A": 0.0, "A5609G": 0.2994050085544586, "A5612G": 0.0, "T5704C": 0.0, "C5731T": 0.6922940015792847, "C5734T": 0.0, "C5743T": 0.0, "G5748A": 0.3625980019569397, "C5754T": 0.0, "G5763A": 0.6918110251426697, "A5788T": 0.0, "G6003A": null, "A6060G": null, "C6430A": null, "G6523A": null, "A6569G": null, "C6607T": null, "A6675G": null, "A6676G": null, "G6900A": null, "A7026G": 0.0, "T7210A": 0.0, "A7219G": 0.01311499997973442, "C7249T": 0.0, "A7395G": 0.0, "C7997T": 0.0, "T8034C": 0.0, "C8143A": 0.0, "A8160G": 0.0, "T8165C": 0.9971780180931091, "A8177G": 0.0, "A8183G": 0.0, "A8189G": 0.0, "A8269G": 0.5531010031700134, "G8272A": 0.0, "G8329A": 0.9985769987106323, "G8346A": null, "A8383G": null, "C8384A": null, "A8427G": null, "T8432G": 0.0, "A8640G": 0.0, "A8670T": 0.0, "A8670C": 0.0, "C9043T": 0.0, "A9066T": 0.0, "G9250A": 0.0, "G9298A": 0.0, "G9768A": 0.0, "C10015A": null, "A10171G": null, "C10301A": null, "T10323C": null, "C10848T": 0.0, "G10873T": 0.0, "A10890C": 0.0, "A11001G": 0.3593960106372833, "G11019A": 0.0, "T11034A": 0.3526169955730438, "G11190A": 0.0, "G11436A": 0.0, "C11475T": 0.1358889937400818, "C11791T": 0.0, "C11932T": 0.0, "A12101T": null, "C12549T": 0.0, "A12667G": 0.0, "C13849T": 0.0, "C13897T": 0.0, "A13929G": 0.0, "A13929T": 0.0, "A13983G": 0.0, "A14040T": 0.0, "G14121C": 0.0, "G14331A": 0.0, "C14356T": 1.0, "T14359A": 0.9972490072250366, "A14381G": 0.0, "A14391C": 0.0, "G14416T": 0.0, "G14571T": 0.0, "C14582A": 0.0, "T14709C": 0.0, "A14722G": 0.0, "A14736G": 0.9912279844284058, "C14737T": 0.0, "G14881A": 0.0}

Metadata

Date
2026-01-04
Location
Geneva
Primer protocol
Eawag-2024-v542
Reference
RSV-A