LOC_0004C46.1

Submission details

Submission ID
H3_16_2025_12_14RSV-A
Submitting group
Date submitted
2026-01-19 10:42:10 UTC
Date released
2026-01-19 10:47:36 UTC

Frequencies

Amino acid mutation frequency
{"N:S21C": 0.0, "N:S32G": 0.0, "N:E55G": 0.0, "N:M67I": 0.0, "N:K84R": 0.0, "N:L114S": 0.0, "N:M194I": 0.0, "N:N207T": 0.0, "N:Y216H": 0.0, "N:R338K": 0.0, "N:V352A": 1.0, "N:Y353C": 0.21033799648284912, "N:L382I": 0.0, "N:V389I": 0.0, "P:E2D": 0.2172359973192215, "P:A17V": 0.0, "P:L55P": 0.9729729890823364, "P:T72N": 0.9850749969482422, "P:V73I": 0.0, "P:K76R": 0.0,...
Nucleotide mutation frequency
{"A1171T": 0.0, "A1204G": 0.0, "A1274G": 0.0, "G1311T": 0.0, "A1361G": 0.0, "T1451C": 0.0, "G1584A": 0.0, "G1584T": 0.06137099862098694, "G1692A": 0.0, "A1730C": 0.0, "T1756C": 0.0, "G2123A": 0.0, "T2165C": 1.0, "A2168G": 0.21033799648284912, "C2254A": 0.0, "G2275A": 0.0, "A2323C": 0.2172359973192215, "C2367T": 0.0, "T2481C": 0.9729729890823364, "C2532A": 0.9850749969482422, "G2534A": 0.0, "A2544G": 0.0, "C2592T": 0.9701489806175232, "A3299G": 0.0, "G3354A": 0.0, "T3365A": 0.27736300230026245, "T3389C": 0.0, "A3407C": 0.0, "A3442C": 0.26952800154685974, "A3518G": 0.0, "C3545T": 0.0, "C3548T": 0.0, "C3551T": 0.0, "G3616T": 0.0, "G3616A": 0.0, "G3616C": 0.0, "G3682A": 0.0, "G3697A": 0.0, "A3751T": 0.0, "A3766G": 0.0, "C3845T": 0.0, "G4410A": 0.0, "T4655G": 0.0, "A4660C": 0.989657998085022, "A4665T": 0.0, "G4674A": 0.0, "G4679A": 0.4855169951915741, "A4775G": 0.010772000066936016, "G4820A": 0.0, "C4850A": 0.0, "C4863T": 1.0, "A4879G": 0.5195310115814209, "C4917T": 0.0, "C4919T": 0.9775829911231995, "T4941C": 0.0, "G4950A": 0.5152109861373901, "C4952T": 1.0, "G4967A": 0.0, "C4974T": 0.0, "C4989T": 1.0, "T4992C": 0.0, "A4993G": 0.48785001039505005, "T4995C": 0.0, "C4998T": 0.0, "T5000C": 0.0, "C5004T": 0.0, "C5009A": 0.0, "C5010T": 0.0, "T5043A": 0.9979959726333618, "T5052A": 0.9979919791221619, "A5057G": 0.0, "A5060G": 0.0, "A5066G": 0.0, "T5076C": 0.0, "C5079T": 0.0, "G5082T": null, "A5183G": 0.0, "A5184G": 0.0, "G5201A": 0.0, "G5234A": 0.0, "C5268A": 0.0, "A5277G": 0.0, "A5279G": 0.04255300015211105, "C5295T": 0.0, "C5301A": 0.502128005027771, "C5310T": 0.0, "A5313G": 0.0, "C5316T": 0.0, "G5322A": 0.9914889931678772, "G5322T": 0.0, "T5325C": 0.0, "C5327T": 0.0, "C5334T": 0.04255300015211105, "A5337G": 0.0, "C5340T": 0.3574469983577728, "A5342G": 0.0, "G5379T": 1.0, "C5380A": 0.04680899903178215, "A5384G": 0.9574469923973083, "C5390A": 0.5063830018043518, "C5393A": 0.0, "C5397T": 0.0, "A5408C": 0.0, "C5418T": 0.0, "C5425A": 1.0, "A5435G": 0.9933329820632935, "A5444C": 0.9865769743919373, "A5448T": 1.0, "T5450C": 0.0, "T5459C": 0.0, "G5465A": 0.0, "T5468C": 0.0, "C5472T": null, "C5478T": null, "G5486A": null, "T5489C": null, "T5498C": null, "A5502G": null, "A5512T": 0.0, "T5531C": 0.0, "A5535T": 0.0, "T5540C": 0.0, "C5544T": 0.999779999256134, "G5547A": 0.0, "G5558A": 0.0, "T5559C": 0.0, "T5561C": 0.0, "C5568T": 0.0, "G5573A": 0.0, "T5580C": 0.0, "C5589T": 0.0, "T5592C": 0.0, "C5601T": 0.0, "A5606T": 0.0, "C5607T": 0.0, "C5607A": 0.0, "A5609G": 0.0, "A5612G": 0.0, "C5731T": 0.9994109869003296, "C5734T": 0.0, "C5743T": 0.0, "G5748A": 0.0, "C5754T": 0.5491179823875427, "G5763A": 0.44780299067497253, "A5788T": 0.0, "G6523A": 0.0, "C6607T": 0.0, "G6900A": 1.0, "A7219G": 0.01524799969047308, "A7395G": 0.0, "A8160G": 0.0, "T8165C": 0.9985049962997437, "A8177G": 0.0, "A8183G": 0.0, "A8189G": 0.0, "A8269G": 0.9990450143814087, "G8329A": 0.999081015586853, "G8346A": 0.0, "A8383G": 0.45794400572776794, "C8384A": 0.45794400572776794, "A8427G": 1.0, "T8432G": 0.5074629783630371, "A8640G": null, "A8670T": null, "C9043T": null, "A9066T": null, "G9250A": null, "G9298A": null, "G9768A": null, "C10015A": 0.03636400029063225, "C10301A": null, "T10323C": null, "C10848T": 0.0, "G10873T": 0.0, "A10890C": 0.0, "A11001G": 1.0, "G11019A": 0.0, "T11034A": 0.9992989897727966, "G11190A": null, "G11436A": 0.0, "C11791T": null, "C11932T": null, "A12101T": 0.26315799355506897, "C12549T": 0.0, "C13849T": 0.0, "C13897T": 0.0, "A13929T": 0.0, "A13929G": 0.0, "A13983G": 0.0, "C14356T": 0.0, "T14359A": 0.0, "A14381G": 0.0, "A14391C": 0.0, "G14416T": 0.0, "G14571T": 0.0, "C14582A": 0.9427139759063721, "A14722G": null, "A14736G": 0.0, "G14881A": null}

Metadata

Date
2025-12-14
Location
Geneva
Primer protocol
Eawag-2024-v542
Reference
RSV-A