LOC_00049LA.1

Submission details

Submission ID
B3_17_2025_11_30RSV-A
Submitting group
Date submitted
2025-12-17 15:50:12 UTC
Date released
2025-12-17 15:52:04 UTC

Frequencies

Amino acid mutation frequency
{"N:S21C": 0.994608998298645, "N:S32G": 0.0, "N:M67I": null, "N:K84R": null, "N:M158I": 0.0, "N:M194I": 0.0, "N:N207T": 0.0, "N:R338K": 0.5359709858894348, "N:V352A": 1.0, "P:L55P": null, "P:K76R": null, "P:T92M": null, "M:K25R": 0.0, "M:M43I": 0.0, "M:Q61P": 0.0, "M:D131N": 0.08957400172948837, "M:D131H": 0.07867799699306488, "M:T176S": null, "M:T181A": null, "SH:V49I": 0.0,...
Nucleotide mutation frequency
{"A1171T": 0.994608998298645, "A1204G": 0.0, "G1311T": null, "A1361G": null, "G1584T": 0.0, "G1692A": 0.0, "A1730C": 0.0, "G2123A": 0.5359709858894348, "T2165C": 1.0, "T2481C": null, "A2544G": null, "C2592T": null, "A3299G": 0.0, "G3354A": 0.0, "A3407C": 0.0, "G3616A": 0.08957400172948837, "G3616C": 0.07867799699306488, "A3751T": null, "A3766G": null, "G4410A": 0.0, "T4655G": 0.05601099878549576, "A4660C": 0.05780300125479698, "G4674A": 0.0, "G4679A": 0.060116998851299286, "C4863T": null, "C4917T": null, "C4919T": null, "T4941C": null, "C4952T": null, "C4989T": null, "C4998T": 0.0, "C5004T": 1.0, "C5009A": 1.0, "T5043A": 0.0, "T5052A": 1.0, "A5057G": 0.0, "A5060G": 0.0, "A5066G": 0.0, "T5076C": 0.0, "C5079T": 0.0, "C5268A": 0.9943689703941345, "A5277G": 0.9985759854316711, "C5310T": 0.0, "C5316T": 0.0, "G5322T": 0.0, "G5322A": 0.9909960031509399, "T5325C": 0.0, "A5337G": 0.007050999905914068, "A5342G": 0.0, "G5379T": 1.0, "C5393A": 0.9979429841041565, "C5397T": 0.0, "A5408C": 0.0, "C5425A": 0.0, "A5435G": 0.9921000003814697, "A5444C": 0.9900659918785095, "A5448T": 0.0, "T5450C": 0.0, "G5465A": 0.0, "T5468C": 0.0, "C5472T": 0.0, "C5478T": 0.0, "G5486A": 0.0, "T5489C": 0.0, "T5498C": 0.999101996421814, "A5502G": 0.999550998210907, "A5512T": 0.0, "T5531C": 0.0, "T5540C": 0.0, "C5544T": 0.34637099504470825, "G5547A": 0.0, "G5558A": 0.0, "T5559C": 0.6547430157661438, "T5561C": 0.6541550159454346, "C5568T": 0.0, "T5580C": 0.6497359871864319, "C5589T": 0.0, "C5601T": 0.653240978717804, "A5606T": 0.0, "C5607T": 0.6506339907646179, "C5607A": 0.0, "A5609G": 0.6500139832496643, "A5612G": 0.0, "C5731T": 0.3683930039405823, "C5743T": 0.0, "G5763A": 0.34601399302482605, "A5788T": 0.6463170051574707, "C6607T": null, "A7219G": null, "A8160G": 0.0, "T8165C": 0.9946240186691284, "A8177G": 0.0, "A8189G": 0.0, "A8269G": 1.0, "G8329A": 1.0, "G8346A": null, "A8383G": null, "C8384A": null, "A8427G": null, "C9043T": 1.0, "A9066T": 0.0, "G9250A": 0.0, "G9298A": 0.0, "G9768A": null, "C10015A": null, "T10323C": null, "C10848T": 0.0, "G10873T": 0.0, "A10890C": 0.0, "A11001G": 1.0, "G11019A": 0.0, "T11034A": 1.0, "G11190A": null, "C11791T": null, "C11932T": null, "C12549T": 0.0, "C13849T": 0.0, "C13897T": 0.0, "A13929G": 0.0, "A13983G": 0.4056920111179352, "C14356T": 0.29698899388313293, "T14359A": 0.2941359877586365, "A14381G": 0.0, "A14391C": 0.0, "G14416T": 0.0, "G14571T": 0.0, "G14881A": null}

Metadata

Date
2025-11-30
Location
Chur
Primer protocol
Eawag-2024-v542
Reference
RSV-A